The 2.0 version of rSNPBase

Variant report

Variant rs62011479
Chromosome Location chr15:78321197-78321198
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:119 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:78296200-78358200 Weak transcription iPS-15b Cell Line embryonic stem cell
2 chr15:78301400-78342200 Weak transcription HMEC breast
3 chr15:78303200-78342400 Weak transcription ES-I3 Cell Line embryonic stem cell
4 chr15:78305400-78329800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
5 chr15:78305600-78325800 Weak transcription Pancreatic Islets Pancreatic Islet
6 chr15:78307200-78342000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
7 chr15:78308800-78327200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
8 chr15:78309200-78330200 Weak transcription iPS-20b Cell Line embryonic stem cell
9 chr15:78309200-78330800 Weak transcription A549 lung
10 chr15:78309200-78354200 Weak transcription iPS-18 Cell Line embryonic stem cell
11 chr15:78309400-78321800 Weak transcription HUES64 Cell Line embryonic stem cell
12 chr15:78311200-78322600 Strong transcription Breast Myoepithelial Primary Cells Breast
13 chr15:78311800-78322400 Strong transcription Primary mononuclear cells fromperipheralblood Blood
14 chr15:78311800-78323400 Strong transcription Primary T regulatory cells fromperipheralblood blood
15 chr15:78311800-78326800 Weak transcription K562 blood
16 chr15:78312000-78323000 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
17 chr15:78312200-78322800 Strong transcription Primary Natural Killer cells fromperipheralblood blood
18 chr15:78312200-78323200 Strong transcription Fetal Intestine Large intestine
19 chr15:78312400-78322200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
20 chr15:78312400-78322400 Strong transcription Primary T helper cells fromperipheralblood blood
21 chr15:78312400-78322400 Strong transcription Thymus Thymus
22 chr15:78312400-78322600 Strong transcription Primary T cells from cord blood blood
23 chr15:78312400-78323200 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
24 chr15:78312600-78322400 Strong transcription Primary T helper 17 cells PMA-I stimulated --
25 chr15:78312600-78322400 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
26 chr15:78312600-78322600 Strong transcription Primary T cells effector/memory enriched fromperipheralblood blood
27 chr15:78312600-78322800 Strong transcription Primary T cells fromperipheralblood blood
28 chr15:78312600-78323200 Strong transcription Primary hematopoietic stem cells short term culture blood
29 chr15:78312600-78323400 Strong transcription Dnd41 blood
30 chr15:78312600-78323400 Strong transcription Osteobl bone
31 chr15:78312800-78322600 Strong transcription Primary T helper naive cells fromperipheralblood blood
32 chr15:78312800-78323200 Strong transcription Primary T helper cells PMA-I stimulated --
33 chr15:78313000-78327600 Weak transcription Fetal Brain Male brain
34 chr15:78316000-78324000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
35 chr15:78316000-78332400 Weak transcription Hela-S3 cervix
36 chr15:78316200-78323200 Strong transcription Rectal Mucosa Donor 29 rectum
37 chr15:78316200-78324600 Strong transcription Fetal Intestine Small intestine
38 chr15:78316200-78326200 Weak transcription Fetal Kidney kidney
39 chr15:78317000-78324200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
40 chr15:78317000-78327800 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
41 chr15:78317000-78344400 Weak transcription H1 Cell Line embryonic stem cell
42 chr15:78317200-78321200 Weak transcription Brain Germinal Matrix brain
43 chr15:78317200-78324000 Weak transcription Muscle Satellite Cultured Cells --
44 chr15:78317400-78321800 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
45 chr15:78317400-78323200 Strong transcription Rectal Mucosa Donor 31 rectum
46 chr15:78317400-78324200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
47 chr15:78317400-78326000 Weak transcription Rectal Smooth Muscle rectum
48 chr15:78317400-78326200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
49 chr15:78317400-78342600 Weak transcription HUES48 Cell Line embryonic stem cell
50 chr15:78317600-78324600 Strong transcription Liver Liver

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Last update: Aug 31, 2015