The 2.0 version of rSNPBase

Variant report

Variant rs894298
Chromosome Location chr15:78376728-78376729
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:62 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:78370400-78377000 Weak transcription Esophagus oesophagus
2 chr15:78370600-78377800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
3 chr15:78370600-78377800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
4 chr15:78370600-78378000 Weak transcription Osteobl bone
5 chr15:78370800-78380000 Weak transcription Primary B cells from peripheral blood blood
6 chr15:78370800-78380400 Weak transcription Liver Liver
7 chr15:78373600-78377200 Enhancers Fetal Intestine Small intestine
8 chr15:78374000-78377200 Enhancers Sigmoid Colon Sigmoid Colon
9 chr15:78374000-78377400 Enhancers Placenta Placenta
10 chr15:78374000-78378000 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
11 chr15:78374000-78378800 Enhancers Primary monocytes fromperipheralblood blood
12 chr15:78374200-78377200 Enhancers Colonic Mucosa Colon
13 chr15:78374200-78377600 Enhancers Rectal Mucosa Donor 31 rectum
14 chr15:78374200-78378800 Enhancers Fetal Muscle Leg muscle
15 chr15:78374600-78377200 Enhancers Fetal Stomach stomach
16 chr15:78374600-78377400 Enhancers Primary hematopoietic stem cells short term culture blood
17 chr15:78374600-78377400 Enhancers Spleen Spleen
18 chr15:78374600-78379000 Enhancers Adipose Nuclei Adipose
19 chr15:78374800-78377200 Enhancers Fetal Intestine Large intestine
20 chr15:78374800-78377600 Enhancers Duodenum Mucosa Duodenum
21 chr15:78375000-78377200 Enhancers Lung lung
22 chr15:78375000-78377600 Enhancers Small Intestine intestine
23 chr15:78375200-78376800 Enhancers Duodenum Smooth Muscle Duodenum
24 chr15:78375200-78377600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
25 chr15:78375400-78377000 Enhancers Brain Anterior Caudate brain
26 chr15:78375400-78377200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
27 chr15:78375400-78377600 Enhancers Primary neutrophils fromperipheralblood blood
28 chr15:78375400-78378000 Weak transcription NHLF lung
29 chr15:78375400-78383800 Weak transcription Skeletal Muscle Female skeletal muscle
30 chr15:78375600-78377000 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
31 chr15:78375600-78379200 Enhancers Fetal Brain Male brain
32 chr15:78375600-78380400 Weak transcription Gastric stomach
33 chr15:78375600-78383800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
34 chr15:78375600-78384400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
35 chr15:78375800-78376800 Weak transcription Primary B cells from cord blood blood
36 chr15:78375800-78380400 Weak transcription Stomach Smooth Muscle stomach
37 chr15:78376000-78377200 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
38 chr15:78376000-78377200 Enhancers Fetal Thymus thymus
39 chr15:78376200-78376800 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
40 chr15:78376200-78376800 Enhancers Skeletal Muscle Male skeletal muscle
41 chr15:78376200-78377000 Enhancers Primary T cells from cord blood blood
42 chr15:78376200-78377000 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
43 chr15:78376200-78377000 Enhancers Stomach Mucosa stomach
44 chr15:78376200-78377000 Flanking Active TSS HepG2 liver
45 chr15:78376200-78377600 Enhancers Fetal Brain Female brain
46 chr15:78376200-78379200 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
47 chr15:78376400-78376800 Enhancers Primary T cells fromperipheralblood blood
48 chr15:78376400-78376800 Flanking Active TSS Monocytes-CD14+_RO01746 blood
49 chr15:78376400-78377000 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
50 chr15:78376400-78377000 Enhancers Cortex derived primary cultured neurospheres brain

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Last update: Aug 31, 2015