Variant report

Variant	rs4896898
Chromosome Location	chr6:147293855-147293856
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 16 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:16)

rs_ID	r²[population]
rs10457807	0.88[EUR][1000 genomes]
rs12198271	0.88[EUR][1000 genomes]
rs1529017	0.81[CEU][hapmap]
rs1881661	0.88[EUR][1000 genomes]
rs1881663	0.87[EUR][1000 genomes]
rs1881665	0.96[CEU][hapmap];0.91[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs2328777	0.86[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs7741525	0.86[EUR][1000 genomes]
rs7765767	0.89[EUR][1000 genomes]
rs9322084	0.89[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs9377040	0.93[CEU][hapmap];0.82[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs9386177	0.96[CEU][hapmap];0.91[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs9390449	0.81[CEU][hapmap]
rs9485136	0.85[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs9497675	0.90[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs9497679	0.88[EUR][1000 genomes]

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:147289200-147294200	Weak transcription	Hela-S3	cervix
2	chr6:147293600-147294000	Enhancers	Osteobl	bone

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links