Variant report

Variant	rs7765767
Chromosome Location	chr6:147324938-147324939
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr6:147220668..147222971-chr6:147322912..147325249,2	K562	blood:
2	chr6:147315835..147318626-chr6:147323386..147326215,2	K562	blood:
3	chr6:147299417..147300923-chr6:147323838..147325399,2	K562	blood:
4	chr6:147205157..147208020-chr6:147323168..147325113,2	K562	blood:

Extended variants
information (count: 37 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:35)

rs_ID	r²[population]
rs10457807	0.98[AFR][1000 genomes];0.95[AMR][1000 genomes];0.90[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs12198271	0.96[AFR][1000 genomes];0.93[AMR][1000 genomes];0.90[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs1406538	0.80[ASN][1000 genomes]
rs1529017	0.81[CEU][hapmap];0.91[JPT][hapmap];0.80[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs1529020	0.83[AMR][1000 genomes]
rs1881661	0.97[AFR][1000 genomes];0.92[AMR][1000 genomes];0.90[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs1881663	0.98[AFR][1000 genomes];0.93[AMR][1000 genomes];0.89[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs1881665	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.83[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs2181942	0.82[CHB][hapmap];0.91[JPT][hapmap]
rs2328777	0.83[AMR][1000 genomes];0.90[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4563735	0.80[AMR][1000 genomes]
rs4896898	0.96[CEU][hapmap];0.89[EUR][1000 genomes]
rs5022638	0.81[ASN][1000 genomes]
rs57624563	0.81[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs6570781	0.87[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs6570784	0.80[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs6570786	0.80[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs6902235	0.88[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs7741525	0.98[AMR][1000 genomes];0.96[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs7742698	0.80[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs7745042	0.83[CHB][hapmap];0.82[JPT][hapmap];0.90[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs7760482	0.80[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs7775644	0.82[AMR][1000 genomes]
rs9322084	0.81[AMR][1000 genomes];0.90[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs9322085	0.86[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs9377040	0.96[CEU][hapmap];0.95[CHB][hapmap];0.86[JPT][hapmap];0.82[YRI][hapmap];0.94[AFR][1000 genomes];0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs9377042	0.84[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs9386177	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.83[AMR][1000 genomes];0.97[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs9390447	0.83[AMR][1000 genomes]
rs9390449	0.81[CEU][hapmap];0.91[JPT][hapmap];0.81[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs9403836	0.91[JPT][hapmap]
rs9485136	0.82[AMR][1000 genomes];0.90[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs9497675	0.80[AMR][1000 genomes];0.90[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs9497678	0.83[AMR][1000 genomes]
rs9497679	0.89[AMR][1000 genomes];0.91[EUR][1000 genomes];0.97[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv13776	chr6:147324012-147334530	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
2	esv2761057	chr6:147324938-147333251	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:147322000-147325000	Weak transcription	Psoas Muscle	Psoas
2	chr6:147322600-147326400	Weak transcription	Rectal Smooth Muscle	rectum
3	chr6:147323200-147325000	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived

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