Variant report

Variant	rs7775644
Chromosome Location	chr6:147302374-147302375
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr6:147297754..147300486-chr6:147300546..147302588,2	MCF-7	breast:
2	chr6:147301808..147303929-chr6:147305995..147308003,2	K562	blood:
3	chr6:147293188..147295503-chr6:147300812..147302743,2	K562	blood:
4	chr6:147299638..147302569-chr6:147311895..147314452,2	K562	blood:
5	chr6:147292795..147294688-chr6:147300812..147302433,2	K562	blood:
6	chr6:147300256..147303345-chr6:147310924..147313456,3	K562	blood:

Extended variants
information (count: 36 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:36)

rs_ID	r²[population]
rs10457807	0.86[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs11155494	0.81[ASN][1000 genomes]
rs12198271	0.88[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs1529016	0.82[JPT][hapmap]
rs1529020	0.95[AFR][1000 genomes];0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs1881661	0.89[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs1881663	0.84[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs1881665	0.95[CEU][hapmap];0.85[CHB][hapmap];0.83[JPT][hapmap]
rs2049753	0.89[AFR][1000 genomes];0.81[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs2049754	0.86[ASN][1000 genomes]
rs2328775	0.86[AFR][1000 genomes];0.94[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2328777	0.85[EUR][1000 genomes]
rs4551178	0.81[ASN][1000 genomes]
rs4563735	0.93[AFR][1000 genomes];0.93[AMR][1000 genomes];0.95[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4895706	0.85[CHB][hapmap];0.91[JPT][hapmap]
rs4896898	0.91[CEU][hapmap]
rs6570781	0.93[AFR][1000 genomes];0.92[AMR][1000 genomes];0.94[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs6902235	0.94[AFR][1000 genomes];0.93[AMR][1000 genomes];0.92[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7741525	0.84[AMR][1000 genomes]
rs7742886	0.81[ASN][1000 genomes]
rs7745042	1.00[CEU][hapmap];0.90[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.93[AFR][1000 genomes];0.91[AMR][1000 genomes];0.90[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7765767	0.82[AMR][1000 genomes]
rs9322084	0.85[EUR][1000 genomes]
rs9322085	0.93[AFR][1000 genomes];0.93[AMR][1000 genomes];0.94[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs9377040	0.95[CEU][hapmap];0.85[CHB][hapmap];1.00[JPT][hapmap];0.82[AMR][1000 genomes]
rs9386176	0.81[ASN][1000 genomes]
rs9386177	0.95[CEU][hapmap];0.85[CHB][hapmap];0.83[JPT][hapmap]
rs9390447	0.97[AFR][1000 genomes];0.99[AMR][1000 genomes];0.97[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs9399592	0.90[CHB][hapmap];0.91[JPT][hapmap];0.81[ASN][1000 genomes]
rs9399593	0.82[CEU][hapmap];0.83[CHB][hapmap];0.82[JPT][hapmap]
rs9403832	0.81[ASN][1000 genomes]
rs9403836	0.84[CHB][hapmap]
rs9485136	0.85[EUR][1000 genomes]
rs9497675	0.85[EUR][1000 genomes]
rs9497678	0.87[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs9497679	0.84[AMR][1000 genomes];0.85[EUR][1000 genomes]

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:147301200-147305400	Enhancers	HepG2	liver
2	chr6:147301800-147302400	Enhancers	Pancreatic Islets	Pancreatic Islet
3	chr6:147302000-147302800	Enhancers	K562	blood
4	chr6:147302200-147305800	Weak transcription	Fetal Intestine Small	intestine

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