Variant report

Variant	rs12198271
Chromosome Location	chr6:147303789-147303790
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr6:147301808..147303929-chr6:147305995..147308003,2	K562	blood:
2	chr6:147303393..147305875-chr6:147310244..147312438,2	K562	blood:

Extended variants
information (count: 43 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:43)

rs_ID	r²[population]
rs10457807	0.97[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs12199143	0.81[ASN][1000 genomes]
rs12203394	0.83[ASN][1000 genomes]
rs1406538	0.83[ASN][1000 genomes]
rs1529020	0.89[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs1881661	0.99[AFR][1000 genomes];0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1881663	0.97[AFR][1000 genomes];0.95[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs1881665	0.84[AMR][1000 genomes];0.91[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2328775	0.85[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs2328777	0.88[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs34746293	0.81[ASN][1000 genomes]
rs4563735	0.86[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs4605904	0.83[ASN][1000 genomes]
rs4609047	0.82[ASN][1000 genomes]
rs4896898	0.88[EUR][1000 genomes]
rs5022638	0.82[ASN][1000 genomes]
rs6570781	0.85[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs6902235	0.86[AMR][1000 genomes]
rs6911913	0.81[ASN][1000 genomes]
rs6936461	0.81[ASN][1000 genomes]
rs6936487	0.80[ASN][1000 genomes]
rs7741525	0.91[AMR][1000 genomes];0.87[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs7745042	0.84[AMR][1000 genomes]
rs7765767	0.96[AFR][1000 genomes];0.93[AMR][1000 genomes];0.90[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7774249	0.83[ASN][1000 genomes]
rs7774926	0.83[ASN][1000 genomes]
rs7775644	0.88[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs9322084	0.86[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9322085	0.84[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs9373518	0.81[ASN][1000 genomes]
rs9377040	0.94[AFR][1000 genomes];0.93[AMR][1000 genomes];0.91[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs9386177	0.84[AMR][1000 genomes];0.91[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs9390445	0.81[ASN][1000 genomes]
rs9390447	0.89[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs9485136	0.87[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9497671	0.81[ASN][1000 genomes]
rs9497672	0.81[ASN][1000 genomes]
rs9497673	0.81[ASN][1000 genomes]
rs9497674	0.81[ASN][1000 genomes]
rs9497675	0.85[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs9497678	0.89[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs9497679	0.93[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs9766272	0.82[ASN][1000 genomes]

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:147301200-147305400	Enhancers	HepG2	liver
2	chr6:147302200-147305800	Weak transcription	Fetal Intestine Small	intestine
3	chr6:147303200-147305400	Weak transcription	Hela-S3	cervix
4	chr6:147303400-147305600	Weak transcription	K562	blood
5	chr6:147303400-147306000	Weak transcription	Pancreatic Islets	Pancreatic Islet

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