Variant report

Variant	rs9497678
Chromosome Location	chr6:147301365-147301366
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr6:147297754..147300486-chr6:147300546..147302588,2	MCF-7	breast:
2	chr6:147293188..147295503-chr6:147300812..147302743,2	K562	blood:
3	chr6:147299638..147302569-chr6:147311895..147314452,2	K562	blood:
4	chr6:147292795..147294688-chr6:147300812..147302433,2	K562	blood:
5	chr6:147300256..147303345-chr6:147310924..147313456,3	K562	blood:

Extended variants
information (count: 24 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:24)

rs_ID	r²[population]
rs10457807	0.87[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs12198271	0.89[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs1529020	0.82[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1881661	0.90[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs1881663	0.85[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs2049753	0.82[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs2049754	0.87[ASN][1000 genomes]
rs2328775	0.98[AFR][1000 genomes];0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs2328777	0.85[EUR][1000 genomes]
rs4551178	0.80[ASN][1000 genomes]
rs4563735	0.81[AFR][1000 genomes];0.94[AMR][1000 genomes];0.96[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs6570781	0.80[AFR][1000 genomes];0.93[AMR][1000 genomes];0.95[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs6902235	0.82[AFR][1000 genomes];0.94[AMR][1000 genomes];0.92[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7741525	0.85[AMR][1000 genomes]
rs7745042	0.80[AFR][1000 genomes];0.92[AMR][1000 genomes];0.91[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7765767	0.83[AMR][1000 genomes]
rs7775644	0.87[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs9322084	0.85[EUR][1000 genomes]
rs9322085	0.80[AFR][1000 genomes];0.94[AMR][1000 genomes];0.95[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs9377040	0.83[AMR][1000 genomes]
rs9390447	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs9485136	0.85[EUR][1000 genomes]
rs9497675	0.85[EUR][1000 genomes]
rs9497679	0.85[AMR][1000 genomes];0.86[EUR][1000 genomes]

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:147301200-147305400	Enhancers	HepG2	liver

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links