Variant report

Variant	rs6570781
Chromosome Location	chr6:147313361-147313362
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr6:147312774..147316690-chr6:147332385..147335094,3	K562	blood:
2	chr6:147300256..147303345-chr6:147310924..147313456,3	K562	blood:
3	chr6:147299638..147302569-chr6:147311895..147314452,2	K562	blood:
4	chr6:147312045..147314178-chr6:147315650..147317217,2	K562	blood:
5	chr6:147312426..147314178-chr6:147315717..147317793,2	K562	blood:

Extended variants
information (count: 26 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:26)

rs_ID	r²[population]
rs10457807	0.87[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs12198271	0.85[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs1529016	0.82[JPT][hapmap]
rs1529020	0.94[AFR][1000 genomes];0.96[AMR][1000 genomes];0.95[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs1881661	0.84[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs1881663	0.85[AMR][1000 genomes]
rs1881665	0.96[CHB][hapmap];0.83[JPT][hapmap];0.82[EUR][1000 genomes]
rs2049753	0.94[AFR][1000 genomes];0.86[AMR][1000 genomes];0.86[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs2049754	0.90[ASN][1000 genomes]
rs2328775	0.89[AMR][1000 genomes];0.93[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs2328777	0.80[EUR][1000 genomes]
rs4563735	0.91[AFR][1000 genomes];0.90[AMR][1000 genomes];0.91[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs4895706	0.91[JPT][hapmap]
rs6902235	0.95[AFR][1000 genomes];0.99[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7741525	0.87[AMR][1000 genomes]
rs7745042	0.96[CEU][hapmap];0.88[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.92[AFR][1000 genomes];0.97[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7765767	0.87[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs7775644	0.93[AFR][1000 genomes];0.92[AMR][1000 genomes];0.94[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs9322085	1.00[AFR][1000 genomes];0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9377040	1.00[CHB][hapmap];1.00[JPT][hapmap];0.87[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs9386177	0.96[CHB][hapmap];0.83[JPT][hapmap];0.82[EUR][1000 genomes]
rs9390447	0.90[AFR][1000 genomes];0.93[AMR][1000 genomes];0.92[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs9399592	0.91[JPT][hapmap]
rs9399593	0.82[JPT][hapmap]
rs9497678	0.80[AFR][1000 genomes];0.93[AMR][1000 genomes];0.95[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs9497679	0.83[AMR][1000 genomes];0.80[EUR][1000 genomes]

No data

Chromatin state (count:16 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:147310200-147313600	Enhancers	Hela-S3	cervix
2	chr6:147310200-147313800	Enhancers	HepG2	liver
3	chr6:147310600-147313400	Enhancers	Muscle Satellite Cultured Cells	--
4	chr6:147311400-147313400	Enhancers	K562	blood
5	chr6:147311400-147313400	Enhancers	NHDF-Ad	bronchial
6	chr6:147311400-147313800	Enhancers	Fetal Adrenal Gland	Adrenal Gland
7	chr6:147311400-147321200	Weak transcription	HSMM	muscle
8	chr6:147311800-147318000	Weak transcription	NHLF	lung
9	chr6:147312200-147313400	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
10	chr6:147312600-147313600	Enhancers	A549	lung
11	chr6:147312600-147318000	Weak transcription	NH-A	brain
12	chr6:147312600-147318400	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
13	chr6:147312600-147321000	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
14	chr6:147312800-147318000	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
15	chr6:147312800-147318200	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
16	chr6:147313000-147318000	Weak transcription	Osteobl	bone

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