The 2.0 version of rSNPBase

Variant report

Variant rs4915790
Chromosome Location chr1:62392494-62392495
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:55 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:62336000-62408600 Weak transcription Pancreas Pancrea
2 chr1:62340400-62399200 Weak transcription Primary hematopoietic stem cells blood
3 chr1:62346200-62417600 Weak transcription Rectal Smooth Muscle rectum
4 chr1:62350200-62397600 Weak transcription Esophagus oesophagus
5 chr1:62350600-62428200 Weak transcription Primary T helper naive cells from peripheral blood blood
6 chr1:62350800-62395800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
7 chr1:62350800-62397800 Weak transcription Primary T cells from cord blood blood
8 chr1:62350800-62417600 Weak transcription Ovary ovary
9 chr1:62353600-62396000 Weak transcription Fetal Kidney kidney
10 chr1:62353800-62408800 Weak transcription Duodenum Smooth Muscle Duodenum
11 chr1:62361600-62408800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
12 chr1:62362000-62408600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
13 chr1:62372400-62408800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
14 chr1:62372400-62417600 Weak transcription H9 Cell Line embryonic stem cell
15 chr1:62374600-62410600 Weak transcription Primary T regulatory cells fromperipheralblood blood
16 chr1:62375200-62404600 Weak transcription Stomach Smooth Muscle stomach
17 chr1:62376200-62417600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
18 chr1:62377200-62396600 Weak transcription Sigmoid Colon Sigmoid Colon
19 chr1:62379400-62393600 Weak transcription Right Ventricle heart
20 chr1:62379800-62392800 Weak transcription Pancreatic Islets Pancreatic Islet
21 chr1:62380600-62408600 Weak transcription Primary T cells fromperipheralblood blood
22 chr1:62380800-62395800 Weak transcription iPS-20b Cell Line embryonic stem cell
23 chr1:62380800-62410000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
24 chr1:62381000-62393200 Weak transcription HUES48 Cell Line embryonic stem cell
25 chr1:62381000-62393600 Weak transcription Primary T helper cells PMA-I stimulated --
26 chr1:62381000-62408200 Weak transcription Primary T helper naive cells fromperipheralblood blood
27 chr1:62381000-62416000 Weak transcription iPS-18 Cell Line embryonic stem cell
28 chr1:62381200-62394600 Weak transcription HUES64 Cell Line embryonic stem cell
29 chr1:62381200-62417400 Weak transcription Skeletal Muscle Female skeletal muscle
30 chr1:62381200-62418400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
31 chr1:62381600-62402800 Weak transcription HepG2 liver
32 chr1:62382400-62393400 Weak transcription Liver Liver
33 chr1:62383400-62408000 Weak transcription HUES6 Cell Line embryonic stem cell
34 chr1:62384600-62403000 Weak transcription Fetal Stomach stomach
35 chr1:62384600-62408200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
36 chr1:62384600-62408800 Weak transcription Fetal Intestine Large intestine
37 chr1:62385000-62494200 Weak transcription Aorta Aorta
38 chr1:62385400-62394800 Weak transcription Rectal Mucosa Donor 31 rectum
39 chr1:62385400-62408400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
40 chr1:62385400-62408600 Weak transcription H1 Cell Line embryonic stem cell
41 chr1:62386000-62394800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
42 chr1:62386000-62408600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
43 chr1:62386200-62397000 Weak transcription Fetal Intestine Small intestine
44 chr1:62387000-62394800 Weak transcription Primary T helper cells fromperipheralblood blood
45 chr1:62388400-62394600 Weak transcription HMEC breast
46 chr1:62388600-62394600 Weak transcription Duodenum Mucosa Duodenum
47 chr1:62388800-62397400 Weak transcription Rectal Mucosa Donor 29 rectum
48 chr1:62389000-62393000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
49 chr1:62389800-62396000 Weak transcription NHEK skin
50 chr1:62390000-62393200 Weak transcription Breast Myoepithelial Primary Cells Breast

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Last update: Aug 31, 2015