The 2.0 version of rSNPBase

Variant report

Variant rs41313250
Chromosome Location chr1:62483623-62483624
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:43 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:62385000-62494200 Weak transcription Aorta Aorta
2 chr1:62409200-62518600 Weak transcription Pancreas Pancrea
3 chr1:62424200-62494200 Weak transcription Esophagus oesophagus
4 chr1:62446600-62487600 Weak transcription HUES64 Cell Line embryonic stem cell
5 chr1:62458800-62521400 Weak transcription Primary T regulatory cells fromperipheralblood blood
6 chr1:62459000-62484000 Weak transcription Duodenum Mucosa Duodenum
7 chr1:62459000-62516000 Weak transcription Rectal Mucosa Donor 29 rectum
8 chr1:62459000-62530600 Weak transcription Primary T helper cells PMA-I stimulated --
9 chr1:62459200-62487800 Weak transcription HUES48 Cell Line embryonic stem cell
10 chr1:62459200-62511200 Weak transcription Gastric stomach
11 chr1:62459200-62550000 Weak transcription Primary T cells fromperipheralblood blood
12 chr1:62459400-62484000 Weak transcription Liver Liver
13 chr1:62459400-62493800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
14 chr1:62459600-62494200 Weak transcription Sigmoid Colon Sigmoid Colon
15 chr1:62460000-62499600 Weak transcription Fetal Intestine Large intestine
16 chr1:62460000-62516400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
17 chr1:62460000-62544600 Weak transcription Primary T helper naive cells fromperipheralblood blood
18 chr1:62460200-62487600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
19 chr1:62460200-62516000 Weak transcription HMEC breast
20 chr1:62466400-62494200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
21 chr1:62469000-62533600 Weak transcription Rectal Smooth Muscle rectum
22 chr1:62469800-62488000 Weak transcription H1 Cell Line embryonic stem cell
23 chr1:62473000-62488200 Weak transcription H9 Cell Line embryonic stem cell
24 chr1:62473800-62487000 Weak transcription HUES6 Cell Line embryonic stem cell
25 chr1:62474200-62518600 Weak transcription Primary T cells from cord blood blood
26 chr1:62479000-62487600 Weak transcription iPS-18 Cell Line embryonic stem cell
27 chr1:62479200-62485200 Weak transcription Primary T helper cells fromperipheralblood blood
28 chr1:62479400-62483800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
29 chr1:62479400-62485600 Weak transcription Ovary ovary
30 chr1:62479400-62488200 Weak transcription Psoas Muscle Psoas
31 chr1:62479400-62490200 Weak transcription Left Ventricle heart
32 chr1:62479400-62490200 Weak transcription Skeletal Muscle Male skeletal muscle
33 chr1:62479400-62493600 Weak transcription Stomach Smooth Muscle stomach
34 chr1:62479400-62496000 Weak transcription Fetal Kidney kidney
35 chr1:62479600-62488000 Weak transcription Skeletal Muscle Female skeletal muscle
36 chr1:62480600-62513000 Weak transcription Primary T killer memory cells from peripheral blood blood
37 chr1:62481800-62484600 Weak transcription Fetal Intestine Small intestine
38 chr1:62482400-62484400 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
39 chr1:62482800-62488000 Weak transcription Pancreatic Islets Pancreatic Islet
40 chr1:62483200-62486000 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
41 chr1:62483400-62488400 Strong transcription Breast Myoepithelial Primary Cells Breast
42 chr1:62483600-62484600 Strong transcription NHEK skin
43 chr1:62483600-62484800 Strong transcription Rectal Mucosa Donor 31 rectum

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015