The 2.0 version of rSNPBase

Variant report

Variant rs72921841
Chromosome Location chr1:62664233-62664234
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:39 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:62660000-62665200 Active TSS H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
2 chr1:62661000-62675600 Weak transcription Right Atrium heart
3 chr1:62661200-62667800 Transcr. at gene 5' and 3' iPS-20b Cell Line embryonic stem cell
4 chr1:62661600-62669000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
5 chr1:62661800-62666400 Transcr. at gene 5' and 3' HUES6 Cell Line embryonic stem cell
6 chr1:62662000-62665800 Transcr. at gene 5' and 3' iPS-18 Cell Line embryonic stem cell
7 chr1:62662000-62666000 Transcr. at gene 5' and 3' H1 Cell Line embryonic stem cell
8 chr1:62662000-62666400 Transcr. at gene 5' and 3' HUES64 Cell Line embryonic stem cell
9 chr1:62662000-62666600 Transcr. at gene 5' and 3' HUES48 Cell Line embryonic stem cell
10 chr1:62662200-62664400 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
11 chr1:62662400-62665800 Transcr. at gene 5' and 3' hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
12 chr1:62663600-62664400 Genic enhancers ES-UCSF4 Cell Line embryonic stem cell
13 chr1:62663600-62664600 Active TSS ES-WA7 Cell Line embryonic stem cell
14 chr1:62663600-62664800 Active TSS iPS DF 19.11 Cell Line embryonic stem cell
15 chr1:62663800-62664400 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
16 chr1:62663800-62664400 Bivalent Enhancer Primary hematopoietic stem cells G-CSF-mobilized Female --
17 chr1:62663800-62664600 Active TSS ES-I3 Cell Line embryonic stem cell
18 chr1:62663800-62665600 Enhancers Liver Liver
19 chr1:62663800-62669000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
20 chr1:62664000-62664400 Active TSS iPS-15b Cell Line embryonic stem cell
21 chr1:62664000-62664400 Enhancers Primary hematopoietic stem cells blood
22 chr1:62664000-62664400 Weak transcription Pancreas Pancrea
23 chr1:62664000-62664600 Active TSS iPS DF 6.9 Cell Line embryonic stem cell
24 chr1:62664000-62664600 Enhancers Fetal Heart heart
25 chr1:62664000-62664600 Enhancers Fetal Muscle Leg muscle
26 chr1:62664000-62664600 Weak transcription Placenta Placenta
27 chr1:62664000-62664800 Enhancers Fetal Adrenal Gland Adrenal Gland
28 chr1:62664000-62664800 Enhancers Fetal Lung lung
29 chr1:62664000-62665200 Active TSS H9 Cell Line embryonic stem cell
30 chr1:62664000-62667400 Weak transcription Placenta Amnion Placenta Amnion
31 chr1:62664000-62668400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
32 chr1:62664000-62668400 Weak transcription Fetal Stomach stomach
33 chr1:62664000-62673000 Weak transcription Fetal Muscle Trunk muscle
34 chr1:62664200-62664400 Flanking Bivalent TSS/Enh Primary hematopoietic stem cells G-CSF-mobilized Male --
35 chr1:62664200-62664400 Enhancers Muscle Satellite Cultured Cells --
36 chr1:62664200-62664600 Enhancers Adipose Nuclei Adipose
37 chr1:62664200-62664800 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
38 chr1:62664200-62664800 Enhancers Ovary ovary
39 chr1:62664200-62664800 Flanking Active TSS HepG2 liver

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Last update: Aug 31, 2015