The 2.0 version of rSNPBase

Variant report

Variant rs12091611
Chromosome Location chr1:62605524-62605525
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:64 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:62508200-62628400 Weak transcription Colonic Mucosa Colon
2 chr1:62536200-62619400 Weak transcription Rectal Smooth Muscle rectum
3 chr1:62545400-62606800 Weak transcription Placenta Amnion Placenta Amnion
4 chr1:62548400-62629800 Weak transcription Primary T helper naive cells from peripheral blood blood
5 chr1:62550200-62607800 Weak transcription Right Ventricle heart
6 chr1:62551800-62614000 Weak transcription Primary T cells from cord blood blood
7 chr1:62554200-62614000 Weak transcription Primary T regulatory cells fromperipheralblood blood
8 chr1:62563600-62617400 Weak transcription Brain Anterior Caudate brain
9 chr1:62566200-62614000 Weak transcription Adipose Nuclei Adipose
10 chr1:62566800-62608000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
11 chr1:62570200-62607800 Weak transcription iPS-20b Cell Line embryonic stem cell
12 chr1:62575200-62608000 Weak transcription Fetal Kidney kidney
13 chr1:62576600-62618000 Weak transcription Psoas Muscle Psoas
14 chr1:62576800-62607800 Weak transcription H9 Cell Line embryonic stem cell
15 chr1:62580000-62611600 Weak transcription Pancreas Pancrea
16 chr1:62580200-62617200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
17 chr1:62584600-62607800 Weak transcription iPS-15b Cell Line embryonic stem cell
18 chr1:62588600-62622600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
19 chr1:62590800-62609400 Weak transcription Sigmoid Colon Sigmoid Colon
20 chr1:62593200-62607800 Weak transcription HUES6 Cell Line embryonic stem cell
21 chr1:62593200-62621800 Weak transcription Primary hematopoietic stem cells blood
22 chr1:62593400-62617600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
23 chr1:62593600-62636200 Weak transcription Spleen Spleen
24 chr1:62593800-62607800 Weak transcription iPS-18 Cell Line embryonic stem cell
25 chr1:62594400-62614800 Weak transcription Primary T killer memory cells from peripheral blood blood
26 chr1:62595000-62612600 Weak transcription Primary T helper cells PMA-I stimulated --
27 chr1:62595200-62607600 Weak transcription HUES48 Cell Line embryonic stem cell
28 chr1:62595200-62614200 Weak transcription Stomach Smooth Muscle stomach
29 chr1:62595200-62625200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
30 chr1:62595400-62614000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
31 chr1:62595600-62607800 Weak transcription H1 Cell Line embryonic stem cell
32 chr1:62595800-62608200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
33 chr1:62596000-62606600 Weak transcription Fetal Intestine Large intestine
34 chr1:62596000-62614000 Weak transcription Left Ventricle heart
35 chr1:62596000-62617800 Weak transcription Aorta Aorta
36 chr1:62596200-62614200 Weak transcription Ovary ovary
37 chr1:62598600-62614000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
38 chr1:62598800-62612600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
39 chr1:62599000-62616000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
40 chr1:62599400-62609000 Strong transcription Breast Myoepithelial Primary Cells Breast
41 chr1:62600600-62607600 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
42 chr1:62602400-62607200 Strong transcription Fetal Intestine Small intestine
43 chr1:62602800-62607800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
44 chr1:62602800-62614000 Weak transcription HMEC breast
45 chr1:62603000-62614200 Weak transcription Primary T cells fromperipheralblood blood
46 chr1:62603600-62609200 Weak transcription NHEK skin
47 chr1:62603800-62607800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
48 chr1:62603800-62613800 Weak transcription Primary T helper naive cells fromperipheralblood blood
49 chr1:62603800-62617200 Weak transcription Fetal Muscle Leg muscle
50 chr1:62603800-62617400 Weak transcription Gastric stomach

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Last update: Aug 31, 2015