Variant report

Variant rs532040592
Chromosome Location chr19:53325283-53325284
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:49 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:53323600-53325400 Active TSS hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
2 chr19:53323600-53325400 Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
3 chr19:53323800-53325400 Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
4 chr19:53323800-53325400 Active TSS Fetal Intestine Large intestine
5 chr19:53323800-53325400 Active TSS GM12878-XiMat blood
6 chr19:53323800-53325600 Active TSS H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
7 chr19:53323800-53325600 Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
8 chr19:53323800-53325600 Active TSS Foreskin Fibroblast Primary Cells skin02 Skin
9 chr19:53324000-53325400 Active TSS HUES48 Cell Line embryonic stem cell
10 chr19:53324000-53325400 Active TSS Breast Myoepithelial Primary Cells Breast
11 chr19:53324000-53325400 Active TSS Primary T cells from cord blood blood
12 chr19:53324000-53325400 Active TSS Ganglion Eminence derived primary cultured neurospheres brain
13 chr19:53324000-53325400 Active TSS Duodenum Mucosa Duodenum
14 chr19:53324000-53325400 Active TSS Fetal Brain Female brain
15 chr19:53324000-53325400 Active TSS Fetal Kidney kidney
16 chr19:53324000-53325400 Active TSS Pancreatic Islets Pancreatic Islet
17 chr19:53324000-53325400 Active TSS Ovary ovary
18 chr19:53324000-53325400 Active TSS HMEC breast
19 chr19:53324200-53325400 Active TSS Brain Inferior Temporal Lobe brain
20 chr19:53324200-53325400 Active TSS Stomach Smooth Muscle stomach
21 chr19:53324200-53325600 Active TSS Liver Liver
22 chr19:53324200-53325600 Active TSS Fetal Lung lung
23 chr19:53324200-53325600 Active TSS Right Atrium heart
24 chr19:53324400-53325400 Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
25 chr19:53324400-53325400 Active TSS Foreskin Melanocyte Primary Cells skin03 Skin
26 chr19:53324400-53325400 Active TSS Brain Hippocampus Middle brain
27 chr19:53324400-53325400 Active TSS Fetal Adrenal Gland Adrenal Gland
28 chr19:53324400-53325400 Active TSS Fetal Brain Male brain
29 chr19:53324400-53325400 Active TSS Fetal Muscle Leg muscle
30 chr19:53324400-53325400 Active TSS Fetal Stomach stomach
31 chr19:53324400-53325600 Active TSS H9 Derived Neuron Cultured Cells ES cell derived
32 chr19:53324600-53325400 Active TSS Primary neutrophils fromperipheralblood blood
33 chr19:53324600-53325400 Active TSS Primary B cells from cord blood blood
34 chr19:53324600-53325400 Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
35 chr19:53325000-53325400 Weak transcription Brain Substantia Nigra brain
36 chr19:53325000-53325400 Flanking Active TSS Fetal Muscle Trunk muscle
37 chr19:53325000-53325600 Weak transcription HepG2 liver
38 chr19:53325200-53325400 Enhancers Primary T cells fromperipheralblood blood
39 chr19:53325200-53325400 Enhancers Primary hematopoietic stem cells blood
40 chr19:53325200-53325400 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
41 chr19:53325200-53325400 Flanking Active TSS Cortex derived primary cultured neurospheres brain
42 chr19:53325200-53325400 Flanking Active TSS Dnd41 blood
43 chr19:53325200-53325400 Weak transcription Monocytes-CD14+_RO01746 blood
44 chr19:53325200-53325600 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
45 chr19:53325200-53325600 Enhancers Primary Natural Killer cells fromperipheralblood blood
46 chr19:53325200-53325600 Enhancers Brain Cingulate Gyrus brain
47 chr19:53325200-53325600 Enhancers Thymus Thymus
48 chr19:53325200-53325600 Enhancers K562 blood
49 chr19:53325200-53333400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell

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