Variant report

Variant rs545105782
Chromosome Location chr19:53357364-53357365
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:124 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:53339000-53357600 Strong transcription Foreskin Fibroblast Primary Cells skin02 Skin
2 chr19:53339000-53357800 ZNF genes & repeats Primary hematopoietic stem cells short term culture blood
3 chr19:53339000-53359200 ZNF genes & repeats Monocytes-CD14+_RO01746 blood
4 chr19:53340800-53357400 ZNF genes & repeats Foreskin Melanocyte Primary Cells skin03 Skin
5 chr19:53340800-53357800 ZNF genes & repeats Primary T regulatory cells fromperipheralblood blood
6 chr19:53342200-53357600 ZNF genes & repeats H1 Derived Mesenchymal Stem Cells ES cell derived
7 chr19:53342400-53357800 ZNF genes & repeats Liver Liver
8 chr19:53343200-53359200 ZNF genes & repeats Primary monocytes fromperipheralblood blood
9 chr19:53344000-53358000 ZNF genes & repeats Lung lung
10 chr19:53345400-53360200 Weak transcription Fetal Heart heart
11 chr19:53345400-53360200 Weak transcription Hela-S3 cervix
12 chr19:53345800-53360400 Weak transcription ES-WA7 Cell Line embryonic stem cell
13 chr19:53346200-53357800 Strong transcription HUES48 Cell Line embryonic stem cell
14 chr19:53346200-53357800 Strong transcription Fetal Stomach stomach
15 chr19:53346400-53357800 Strong transcription Fetal Muscle Leg muscle
16 chr19:53346400-53360400 Weak transcription Fetal Brain Male brain
17 chr19:53347600-53357600 Strong transcription iPS-20b Cell Line embryonic stem cell
18 chr19:53347600-53360000 Weak transcription HMEC breast
19 chr19:53347800-53357600 Strong transcription Stomach Smooth Muscle stomach
20 chr19:53348000-53359200 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
21 chr19:53348000-53359200 Strong transcription HUES6 Cell Line embryonic stem cell
22 chr19:53348000-53360200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
23 chr19:53348200-53357600 Strong transcription Adipose Nuclei Adipose
24 chr19:53348200-53358200 Strong transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
25 chr19:53348600-53357600 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
26 chr19:53348600-53358800 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
27 chr19:53348600-53360200 Weak transcription Stomach Mucosa stomach
28 chr19:53349200-53360200 Weak transcription Pancreatic Islets Pancreatic Islet
29 chr19:53349600-53357600 Strong transcription Fetal Adrenal Gland Adrenal Gland
30 chr19:53349800-53360000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
31 chr19:53349800-53360000 Weak transcription iPS-15b Cell Line embryonic stem cell
32 chr19:53350000-53357800 Strong transcription Breast Myoepithelial Primary Cells Breast
33 chr19:53350200-53359200 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
34 chr19:53350600-53357400 Strong transcription Small Intestine intestine
35 chr19:53350800-53358000 Strong transcription Primary Natural Killer cells fromperipheralblood blood
36 chr19:53351000-53357400 Strong transcription Muscle Satellite Cultured Cells --
37 chr19:53351000-53357800 ZNF genes & repeats Fetal Intestine Small intestine
38 chr19:53351200-53358400 Strong transcription Dnd41 blood
39 chr19:53351600-53357600 ZNF genes & repeats H9 Derived Neuron Cultured Cells ES cell derived
40 chr19:53351600-53357600 Strong transcription Primary T helper cells PMA-I stimulated --
41 chr19:53351600-53357800 Strong transcription Duodenum Smooth Muscle Duodenum
42 chr19:53351600-53358000 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
43 chr19:53351600-53360200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
44 chr19:53351800-53357600 Strong transcription Primary B cells from peripheral blood blood
45 chr19:53351800-53357800 Strong transcription Rectal Mucosa Donor 29 rectum
46 chr19:53352000-53357600 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
47 chr19:53352000-53357600 Strong transcription Primary T helper cells fromperipheralblood blood
48 chr19:53352000-53357800 Strong transcription Primary T cells fromperipheralblood blood
49 chr19:53352000-53359200 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
50 chr19:53352000-53360200 Weak transcription Brain Substantia Nigra brain

Quick Search:


  
Input of quick search could be:

what's new

Quick links