The 2.0 version of rSNPBase

Variant report

Variant rs55697146
Chromosome Location chr9:101776010-101776011
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:51 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:101761600-101814400 Weak transcription Gastric stomach
2 chr9:101761800-101777800 Weak transcription Pancreas Pancrea
3 chr9:101761800-101785200 Weak transcription Skeletal Muscle Female skeletal muscle
4 chr9:101763600-101778000 Weak transcription HSMMtube muscle
5 chr9:101767600-101782000 Weak transcription Rectal Smooth Muscle rectum
6 chr9:101768200-101777200 Enhancers Hela-S3 cervix
7 chr9:101768800-101778000 Weak transcription Skeletal Muscle Male skeletal muscle
8 chr9:101768800-101787200 Weak transcription Right Atrium heart
9 chr9:101769000-101790400 Weak transcription Rectal Mucosa Donor 29 rectum
10 chr9:101769200-101777600 Weak transcription Right Ventricle heart
11 chr9:101769400-101777800 Weak transcription Colon Smooth Muscle Colon
12 chr9:101769400-101777800 Weak transcription Duodenum Smooth Muscle Duodenum
13 chr9:101771400-101776600 Weak transcription Placenta Amnion Placenta Amnion
14 chr9:101772800-101778000 Weak transcription Ovary ovary
15 chr9:101773000-101776200 Weak transcription Fetal Adrenal Gland Adrenal Gland
16 chr9:101773000-101777000 Weak transcription Placenta Placenta
17 chr9:101773000-101777400 Weak transcription Fetal Stomach stomach
18 chr9:101773000-101777800 Weak transcription Left Ventricle heart
19 chr9:101773000-101793600 Weak transcription Aorta Aorta
20 chr9:101774000-101777800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
21 chr9:101774600-101781200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
22 chr9:101774800-101784600 Strong transcription Fetal Muscle Leg muscle
23 chr9:101775200-101777000 Enhancers Primary Natural Killer cells fromperipheralblood blood
24 chr9:101775200-101778000 Enhancers Primary T cells fromperipheralblood blood
25 chr9:101775400-101776800 Enhancers Primary B cells from peripheral blood blood
26 chr9:101775400-101776800 Enhancers K562 blood
27 chr9:101775400-101777000 Enhancers Primary T helper 17 cells PMA-I stimulated --
28 chr9:101775400-101777000 Enhancers Primary T helper cells fromperipheralblood blood
29 chr9:101775400-101777000 Enhancers Primary T killer memory cells from peripheral blood blood
30 chr9:101775400-101777000 Enhancers Fetal Thymus thymus
31 chr9:101775400-101777200 Enhancers Primary T helper cells PMA-I stimulated --
32 chr9:101775400-101777200 Enhancers Primary T killer naive cells fromperipheralblood blood
33 chr9:101775400-101782400 Strong transcription Stomach Smooth Muscle stomach
34 chr9:101775400-101784800 Strong transcription Fetal Muscle Trunk muscle
35 chr9:101775600-101776400 Flanking Active TSS Primary T regulatory cells fromperipheralblood blood
36 chr9:101775600-101776600 Enhancers Primary B cells from cord blood blood
37 chr9:101775600-101776600 Enhancers Primary mononuclear cells fromperipheralblood Blood
38 chr9:101775600-101785200 Strong transcription Adipose Nuclei Adipose
39 chr9:101775800-101776200 Enhancers Primary hematopoietic stem cells short term culture blood
40 chr9:101775800-101776200 Flanking Active TSS Primary T helper memory cells from peripheral blood 2 blood
41 chr9:101775800-101776400 Enhancers Primary hematopoietic stem cells blood
42 chr9:101775800-101776400 Flanking Active TSS Primary T helper memory cells from peripheral blood 1 blood
43 chr9:101775800-101776600 Flanking Active TSS Primary T helper naive cells fromperipheralblood blood
44 chr9:101775800-101776600 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
45 chr9:101775800-101776800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
46 chr9:101775800-101776800 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
47 chr9:101775800-101777000 Enhancers Thymus Thymus
48 chr9:101776000-101776400 Flanking Active TSS Primary T helper naive cells from peripheral blood blood
49 chr9:101776000-101776400 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
50 chr9:101776000-101776600 Enhancers Fetal Intestine Small intestine

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Last update: Aug 31, 2015