The 2.0 version of rSNPBase

Variant report

Variant rs55980075
Chromosome Location chr9:101827828-101827829
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:54 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:101793800-101837600 Weak transcription Psoas Muscle Psoas
2 chr9:101807000-101831800 Strong transcription Fetal Muscle Trunk muscle
3 chr9:101807600-101831800 Strong transcription Fetal Muscle Leg muscle
4 chr9:101813200-101833000 Weak transcription Lung lung
5 chr9:101814200-101829400 Weak transcription Fetal Intestine Small intestine
6 chr9:101816200-101844200 Weak transcription Gastric stomach
7 chr9:101818000-101834800 Weak transcription Pancreas Pancrea
8 chr9:101818800-101829000 Weak transcription Ovary ovary
9 chr9:101820200-101831000 Weak transcription Colonic Mucosa Colon
10 chr9:101820400-101828000 Weak transcription Right Atrium heart
11 chr9:101820800-101828000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
12 chr9:101821800-101828400 Weak transcription Placenta Amnion Placenta Amnion
13 chr9:101821800-101829000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
14 chr9:101821800-101834800 Strong transcription Stomach Smooth Muscle stomach
15 chr9:101822000-101834000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
16 chr9:101822200-101828000 Weak transcription HSMM muscle
17 chr9:101822200-101829000 Weak transcription Left Ventricle heart
18 chr9:101822200-101832800 Weak transcription Skeletal Muscle Male skeletal muscle
19 chr9:101822400-101828400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
20 chr9:101822400-101832400 Weak transcription NHDF-Ad bronchial
21 chr9:101822400-101837600 Weak transcription Skeletal Muscle Female skeletal muscle
22 chr9:101822400-101838600 Weak transcription Sigmoid Colon Sigmoid Colon
23 chr9:101823000-101831400 Weak transcription Thymus Thymus
24 chr9:101823200-101831000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
25 chr9:101823400-101830800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
26 chr9:101823400-101831400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
27 chr9:101823400-101831600 Weak transcription Primary B cells from peripheral blood blood
28 chr9:101823600-101830800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
29 chr9:101824000-101833200 Strong transcription Fetal Adrenal Gland Adrenal Gland
30 chr9:101824200-101831400 Strong transcription Fetal Stomach stomach
31 chr9:101824400-101831200 Weak transcription Primary hematopoietic stem cells short term culture blood
32 chr9:101824800-101828200 Weak transcription Primary T cells fromperipheralblood blood
33 chr9:101825200-101836200 Weak transcription Fetal Brain Female brain
34 chr9:101825600-101828400 Weak transcription K562 blood
35 chr9:101825600-101830600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
36 chr9:101825800-101830800 Weak transcription Primary T helper naive cells from peripheral blood blood
37 chr9:101826000-101830800 Weak transcription Primary T helper cells fromperipheralblood blood
38 chr9:101826200-101828000 Weak transcription Rectal Smooth Muscle rectum
39 chr9:101826200-101830800 Weak transcription Primary T cells from cord blood blood
40 chr9:101826200-101830800 Weak transcription Primary T helper cells PMA-I stimulated --
41 chr9:101826400-101829000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
42 chr9:101826600-101833200 Weak transcription Right Ventricle heart
43 chr9:101826600-101848200 Weak transcription Aorta Aorta
44 chr9:101826800-101828200 Weak transcription HSMMtube muscle
45 chr9:101826800-101831000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
46 chr9:101827000-101828600 Weak transcription Colon Smooth Muscle Colon
47 chr9:101827000-101830800 Weak transcription Primary T killer naive cells fromperipheralblood blood
48 chr9:101827000-101832400 Strong transcription Adipose Nuclei Adipose
49 chr9:101827200-101830000 Weak transcription Primary T killer memory cells from peripheral blood blood
50 chr9:101827600-101828200 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived

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Last update: Aug 31, 2015