The 2.0 version of rSNPBase

Variant report

Variant rs41283638
Chromosome Location chr9:101800852-101800853
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:57 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:101761600-101814400 Weak transcription Gastric stomach
2 chr9:101782000-101819800 Weak transcription Colonic Mucosa Colon
3 chr9:101787200-101806400 Weak transcription Ovary ovary
4 chr9:101788200-101803200 Weak transcription Spleen Spleen
5 chr9:101789000-101812000 Weak transcription Esophagus oesophagus
6 chr9:101789200-101805400 Weak transcription Right Ventricle heart
7 chr9:101793400-101802000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
8 chr9:101793600-101802000 Weak transcription Placenta Amnion Placenta Amnion
9 chr9:101793800-101837600 Weak transcription Psoas Muscle Psoas
10 chr9:101794000-101801800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
11 chr9:101795400-101803200 Strong transcription Fetal Muscle Trunk muscle
12 chr9:101795800-101803200 Strong transcription Adipose Nuclei Adipose
13 chr9:101796000-101802000 Strong transcription Fetal Adrenal Gland Adrenal Gland
14 chr9:101796200-101806400 Strong transcription Stomach Smooth Muscle stomach
15 chr9:101796600-101801800 Weak transcription Primary hematopoietic stem cells short term culture blood
16 chr9:101797400-101801200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
17 chr9:101797800-101802000 Weak transcription Left Ventricle heart
18 chr9:101798200-101801600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
19 chr9:101798200-101801800 Weak transcription Primary T helper cells PMA-I stimulated --
20 chr9:101798200-101803200 Weak transcription Primary T killer naive cells fromperipheralblood blood
21 chr9:101798200-101811400 Weak transcription Primary T helper cells fromperipheralblood blood
22 chr9:101798400-101803200 Weak transcription Primary T cells from cord blood blood
23 chr9:101798400-101819800 Weak transcription Skeletal Muscle Female skeletal muscle
24 chr9:101798800-101803200 Weak transcription Thymus Thymus
25 chr9:101799000-101802800 Enhancers Fetal Brain Male brain
26 chr9:101799000-101804600 Enhancers HSMM muscle
27 chr9:101799200-101801800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
28 chr9:101799200-101802000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
29 chr9:101799200-101803200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
30 chr9:101799200-101814600 Weak transcription Pancreas Pancrea
31 chr9:101799400-101804000 Genic enhancers Fetal Muscle Leg muscle
32 chr9:101799400-101804200 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
33 chr9:101799400-101805200 Weak transcription Skeletal Muscle Male skeletal muscle
34 chr9:101799600-101803200 Weak transcription Duodenum Smooth Muscle Duodenum
35 chr9:101799800-101801200 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
36 chr9:101799800-101802000 Weak transcription Colon Smooth Muscle Colon
37 chr9:101799800-101802000 Enhancers NHDF-Ad bronchial
38 chr9:101800000-101801200 Bivalent Enhancer Muscle Satellite Cultured Cells --
39 chr9:101800000-101801400 Flanking Active TSS HSMMtube muscle
40 chr9:101800000-101802800 Genic enhancers IMR90 fetal lung fibroblasts Cell Line lung
41 chr9:101800000-101804200 Enhancers Osteobl bone
42 chr9:101800200-101801000 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
43 chr9:101800200-101804200 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
44 chr9:101800200-101806800 Weak transcription Rectal Smooth Muscle rectum
45 chr9:101800400-101801000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
46 chr9:101800400-101801400 Flanking Active TSS H9 Derived Neuron Cultured Cells ES cell derived
47 chr9:101800400-101802000 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
48 chr9:101800600-101801000 Enhancers Fetal Kidney kidney
49 chr9:101800600-101801200 Enhancers Brain Germinal Matrix brain
50 chr9:101800600-101801800 Enhancers Fetal Stomach stomach

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Last update: Aug 31, 2015