Variant report

rSNPs within LD-proxies of this variant (count:23)

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv901966	chr14:56160904-56436203	Weak transcription Bivalent Enhancer Enhancers ZNF genes & repeats Flanking Active TSS Active TSS Bivalent/Poised TSS Strong transcription Genic enhancers Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
2	nsv901977	chr14:56213392-56492996	Enhancers Active TSS Flanking Active TSS Weak transcription Bivalent/Poised TSS Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh Strong transcription Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
3	esv34106	chr14:56346245-56550642	Enhancers Weak transcription Flanking Active TSS Active TSS Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:22 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:56349800-56358800	Weak transcription	H1 Cell Line	embryonic stem cell
2	chr14:56352000-56355800	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
3	chr14:56352000-56355800	Weak transcription	NHEK	skin
4	chr14:56354000-56355800	Weak transcription	Brain Anterior Caudate	brain
5	chr14:56354600-56356200	Enhancers	Breast Myoepithelial Primary Cells	Breast
6	chr14:56354600-56356200	Enhancers	Brain Germinal Matrix	brain
7	chr14:56355000-56356000	Enhancers	Pancreas	Pancrea
8	chr14:56355000-56356200	Enhancers	Psoas Muscle	Psoas
9	chr14:56355000-56356200	Enhancers	Skeletal Muscle Female	skeletal muscle
10	chr14:56355000-56356400	Enhancers	Skeletal Muscle Male	skeletal muscle
11	chr14:56355000-56356400	Enhancers	HMEC	breast
12	chr14:56355200-56356000	Enhancers	Fetal Brain Male	brain
13	chr14:56355200-56356000	Enhancers	Fetal Brain Female	brain
14	chr14:56355200-56356000	Enhancers	Stomach Mucosa	stomach
15	chr14:56355200-56356400	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
16	chr14:56355200-56356600	Enhancers	Hela-S3	cervix
17	chr14:56355400-56356200	Enhancers	A549	lung
18	chr14:56355600-56355800	Weak transcription	iPS-18 Cell Line	embryonic stem cell
19	chr14:56355600-56356000	Enhancers	ES-I3 Cell Line	embryonic stem cell
20	chr14:56355600-56356200	Enhancers	iPS-20b Cell Line	embryonic stem cell
21	chr14:56355600-56356200	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
22	chr14:56355600-56356200	Weak transcription	Colon Smooth Muscle	Colon

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