Variant report

Variant rs55851123
Chromosome Location chr16:48087609-48087610
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:46 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr16:48076200-48088800 Weak transcription ES-WA7 Cell Line embryonic stem cell
2 chr16:48081400-48088800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
3 chr16:48081600-48088800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
4 chr16:48083600-48089600 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
5 chr16:48085000-48088800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
6 chr16:48085400-48088600 Weak transcription Right Atrium heart
7 chr16:48085800-48088000 Enhancers Cortex derived primary cultured neurospheres brain
8 chr16:48085800-48088600 Enhancers Fetal Brain Male brain
9 chr16:48086000-48087800 Enhancers Fetal Lung lung
10 chr16:48086000-48088600 Enhancers Fetal Brain Female brain
11 chr16:48086000-48089400 Enhancers Ovary ovary
12 chr16:48086200-48088000 Enhancers HUES6 Cell Line embryonic stem cell
13 chr16:48086400-48089000 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
14 chr16:48086600-48088200 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
15 chr16:48086600-48088600 Enhancers Brain Germinal Matrix brain
16 chr16:48086600-48088800 Enhancers Fetal Adrenal Gland Adrenal Gland
17 chr16:48086600-48089400 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
18 chr16:48086800-48087800 Enhancers HUES48 Cell Line embryonic stem cell
19 chr16:48086800-48087800 Bivalent Enhancer Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
20 chr16:48086800-48087800 Enhancers Adipose Nuclei Adipose
21 chr16:48086800-48087800 Enhancers NH-A brain
22 chr16:48086800-48088000 Enhancers iPS-20b Cell Line embryonic stem cell
23 chr16:48086800-48088200 Enhancers HUES64 Cell Line embryonic stem cell
24 chr16:48086800-48088200 Enhancers Placenta Placenta
25 chr16:48086800-48088800 Enhancers Osteobl bone
26 chr16:48086800-48089000 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
27 chr16:48086800-48089000 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
28 chr16:48087000-48088000 Enhancers ES-I3 Cell Line embryonic stem cell
29 chr16:48087000-48088200 Enhancers HMEC breast
30 chr16:48087000-48088800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
31 chr16:48087200-48087800 Enhancers iPS-15b Cell Line embryonic stem cell
32 chr16:48087200-48088000 Enhancers NHEK skin
33 chr16:48087200-48088200 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
34 chr16:48087200-48088200 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
35 chr16:48087200-48088800 Enhancers iPS-18 Cell Line embryonic stem cell
36 chr16:48087200-48090000 Enhancers A549 lung
37 chr16:48087400-48087800 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
38 chr16:48087400-48087800 Enhancers Spleen Spleen
39 chr16:48087400-48088200 Enhancers Fetal Muscle Trunk muscle
40 chr16:48087400-48088400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
41 chr16:48087400-48089600 Enhancers NHDF-Ad bronchial
42 chr16:48087600-48087800 Enhancers H1 Cell Line embryonic stem cell
43 chr16:48087600-48087800 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
44 chr16:48087600-48087800 Flanking Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
45 chr16:48087600-48088000 Enhancers NHLF lung
46 chr16:48087600-48088600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin

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