Variant report
| Variant | rs55872244 |
|---|---|
| Chromosome Location | chr10:27522857-27522858 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr10:27473200-27524200 | Weak transcription | Stomach Mucosa | stomach |
| 2 | chr10:27475600-27528600 | Weak transcription | ES-I3 Cell Line | embryonic stem cell |
| 3 | chr10:27476200-27528600 | Weak transcription | hESC Derived CD56+ Ectoderm Cultured Cells | ES cell derived |
| 4 | chr10:27481600-27527800 | Weak transcription | Psoas Muscle | Psoas |
| 5 | chr10:27488600-27528600 | Weak transcription | iPS DF 6.9 Cell Line | embryonic stem cell |
| 6 | chr10:27491800-27527800 | Weak transcription | Fetal Brain Male | brain |
| 7 | chr10:27494800-27528200 | Weak transcription | K562 | blood |
| 8 | chr10:27500000-27528000 | Weak transcription | NHLF | lung |
| 9 | chr10:27500000-27528400 | Weak transcription | Pancreatic Islets | Pancreatic Islet |
| 10 | chr10:27500800-27528000 | Weak transcription | HMEC | breast |
| 11 | chr10:27501000-27528000 | Weak transcription | Foreskin Fibroblast Primary Cells skin02 | Skin |
| 12 | chr10:27503200-27528200 | Weak transcription | iPS-18 Cell Line | embryonic stem cell |
| 13 | chr10:27504000-27528200 | Weak transcription | Brain Substantia Nigra | brain |
| 14 | chr10:27505200-27527800 | Weak transcription | Right Ventricle | heart |
| 15 | chr10:27505600-27528000 | Weak transcription | NHEK | skin |
| 16 | chr10:27508400-27528400 | Weak transcription | Foreskin Keratinocyte Primary Cells skin02 | Skin |
| 17 | chr10:27508600-27527800 | Weak transcription | Foreskin Melanocyte Primary Cells skin01 | Skin |
| 18 | chr10:27508600-27527800 | Weak transcription | Colonic Mucosa | Colon |
| 19 | chr10:27508600-27529000 | Weak transcription | Placenta Amnion | Placenta Amnion |
| 20 | chr10:27508800-27523400 | Weak transcription | HepG2 | liver |
| 21 | chr10:27508800-27527800 | Weak transcription | Pancreas | Pancrea |
| 22 | chr10:27508800-27527800 | Weak transcription | Spleen | Spleen |
| 23 | chr10:27508800-27528000 | Weak transcription | Brain Germinal Matrix | brain |
| 24 | chr10:27508800-27528600 | Weak transcription | H9 Cell Line | embryonic stem cell |
| 25 | chr10:27508800-27528600 | Weak transcription | Esophagus | oesophagus |
| 26 | chr10:27508800-27528600 | Weak transcription | Thymus | Thymus |
| 27 | chr10:27508800-27528600 | Weak transcription | HSMMtube | muscle |
| 28 | chr10:27508800-27528800 | Weak transcription | Aorta | Aorta |
| 29 | chr10:27508800-27529000 | Weak transcription | Small Intestine | intestine |
| 30 | chr10:27509600-27524000 | Weak transcription | Primary T helper memory cells from peripheral blood 1 | blood |
| 31 | chr10:27509600-27526000 | Weak transcription | Fetal Heart | heart |
| 32 | chr10:27511200-27528200 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 33 | chr10:27511800-27527200 | Weak transcription | Brain Angular Gyrus | brain |
| 34 | chr10:27511800-27527800 | Weak transcription | Primary hematopoietic stem cells | blood |
| 35 | chr10:27511800-27528200 | Weak transcription | Fetal Kidney | kidney |
| 36 | chr10:27512200-27527800 | Weak transcription | Muscle Satellite Cultured Cells | -- |
| 37 | chr10:27512200-27527800 | Weak transcription | Rectal Smooth Muscle | rectum |
| 38 | chr10:27512200-27528000 | Weak transcription | ES-UCSF4 Cell Line | embryonic stem cell |
| 39 | chr10:27512200-27528200 | Weak transcription | iPS-20b Cell Line | embryonic stem cell |
| 40 | chr10:27512200-27528200 | Weak transcription | Osteobl | bone |
| 41 | chr10:27512400-27528200 | Weak transcription | HUES48 Cell Line | embryonic stem cell |
| 42 | chr10:27512400-27528200 | Weak transcription | HUES6 Cell Line | embryonic stem cell |
| 43 | chr10:27514000-27524400 | Strong transcription | Monocytes-CD14+_RO01746 | blood |
| 44 | chr10:27514400-27524200 | Strong transcription | Primary monocytes fromperipheralblood | blood |
| 45 | chr10:27515000-27527400 | Weak transcription | Primary T cells from cord blood | blood |
| 46 | chr10:27515200-27524600 | Weak transcription | Primary T helper naive cells fromperipheralblood | blood |
| 47 | chr10:27515400-27525000 | Strong transcription | Primary mononuclear cells fromperipheralblood | Blood |
| 48 | chr10:27515600-27523200 | Strong transcription | Primary T regulatory cells fromperipheralblood | blood |
| 49 | chr10:27515600-27524400 | Strong transcription | Primary hematopoietic stem cells G-CSF-mobilized Female | -- |
| 50 | chr10:27515800-27524800 | Strong transcription | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
