The 2.0 version of rSNPBase

Variant report

Variant rs56038206
Chromosome Location chr9:116247994-116247995
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:65 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:116227400-116263800 Weak transcription Colonic Mucosa Colon
2 chr9:116231600-116249800 Weak transcription Hela-S3 cervix
3 chr9:116235000-116251200 Weak transcription Primary hematopoietic stem cells blood
4 chr9:116236200-116252400 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
5 chr9:116239200-116250200 Weak transcription Psoas Muscle Psoas
6 chr9:116240400-116254600 Weak transcription H9 Cell Line embryonic stem cell
7 chr9:116241200-116252800 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
8 chr9:116241800-116248800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
9 chr9:116241800-116252200 Strong transcription Fetal Intestine Small intestine
10 chr9:116242000-116248000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
11 chr9:116242000-116254200 Weak transcription Brain Germinal Matrix brain
12 chr9:116242000-116254200 Weak transcription Fetal Thymus thymus
13 chr9:116242000-116255200 Weak transcription H1 Cell Line embryonic stem cell
14 chr9:116242000-116263600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
15 chr9:116242000-116266200 Weak transcription Sigmoid Colon Sigmoid Colon
16 chr9:116242600-116254200 Weak transcription Fetal Brain Female brain
17 chr9:116244000-116248000 Weak transcription Rectal Mucosa Donor 31 rectum
18 chr9:116244000-116249600 Weak transcription Liver Liver
19 chr9:116244800-116248400 Enhancers Fetal Heart heart
20 chr9:116245000-116248800 Enhancers Colon Smooth Muscle Colon
21 chr9:116245000-116249000 Strong transcription Fetal Intestine Large intestine
22 chr9:116245800-116248000 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
23 chr9:116245800-116248400 Enhancers HUVEC blood vessel
24 chr9:116245800-116248800 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
25 chr9:116245800-116248800 Enhancers Right Ventricle heart
26 chr9:116245800-116248800 Enhancers Skeletal Muscle Female skeletal muscle
27 chr9:116246000-116248600 Enhancers NHLF lung
28 chr9:116246400-116250400 Weak transcription Lung lung
29 chr9:116246600-116248200 Enhancers HSMMtube muscle
30 chr9:116246600-116248400 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
31 chr9:116246600-116248400 Enhancers Muscle Satellite Cultured Cells --
32 chr9:116246600-116248400 Enhancers HSMM muscle
33 chr9:116246600-116248800 Enhancers NH-A brain
34 chr9:116246600-116248800 Enhancers Osteobl bone
35 chr9:116246600-116250600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
36 chr9:116246600-116254400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
37 chr9:116246800-116251800 Strong transcription HepG2 liver
38 chr9:116246800-116254800 Weak transcription Fetal Muscle Trunk muscle
39 chr9:116247000-116248000 Weak transcription Primary hematopoietic stem cells short term culture blood
40 chr9:116247000-116248000 Weak transcription Rectal Smooth Muscle rectum
41 chr9:116247000-116248000 Weak transcription Right Atrium heart
42 chr9:116247000-116248200 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
43 chr9:116247000-116248600 Weak transcription Pancreas Pancrea
44 chr9:116247000-116253600 Weak transcription Fetal Muscle Leg muscle
45 chr9:116247000-116254600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
46 chr9:116247000-116254800 Weak transcription Stomach Mucosa stomach
47 chr9:116247200-116248000 Weak transcription Duodenum Mucosa Duodenum
48 chr9:116247200-116248400 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
49 chr9:116247200-116248800 Enhancers NHDF-Ad bronchial
50 chr9:116247200-116254600 Weak transcription Fetal Adrenal Gland Adrenal Gland

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Last update: Aug 31, 2015