Variant report

Variant rs12335991
Chromosome Location chr9:116246535-116246536
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:66 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:116227400-116263800 Weak transcription Colonic Mucosa Colon
2 chr9:116231600-116249800 Weak transcription Hela-S3 cervix
3 chr9:116231800-116246600 Weak transcription Primary hematopoietic stem cells short term culture blood
4 chr9:116235000-116251200 Weak transcription Primary hematopoietic stem cells blood
5 chr9:116236200-116252400 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
6 chr9:116239200-116250200 Weak transcription Psoas Muscle Psoas
7 chr9:116240400-116254600 Weak transcription H9 Cell Line embryonic stem cell
8 chr9:116241200-116252800 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
9 chr9:116241600-116247800 Weak transcription Rectal Mucosa Donor 29 rectum
10 chr9:116241800-116248800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
11 chr9:116241800-116252200 Strong transcription Fetal Intestine Small intestine
12 chr9:116242000-116248000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
13 chr9:116242000-116254200 Weak transcription Brain Germinal Matrix brain
14 chr9:116242000-116254200 Weak transcription Fetal Thymus thymus
15 chr9:116242000-116255200 Weak transcription H1 Cell Line embryonic stem cell
16 chr9:116242000-116263600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
17 chr9:116242000-116266200 Weak transcription Sigmoid Colon Sigmoid Colon
18 chr9:116242400-116246600 Weak transcription Stomach Mucosa stomach
19 chr9:116242600-116254200 Weak transcription Fetal Brain Female brain
20 chr9:116242800-116247000 Enhancers Pancreas Pancrea
21 chr9:116243200-116247800 Weak transcription Gastric stomach
22 chr9:116244000-116247600 Weak transcription A549 lung
23 chr9:116244000-116248000 Weak transcription Rectal Mucosa Donor 31 rectum
24 chr9:116244000-116249600 Weak transcription Liver Liver
25 chr9:116244800-116247000 Enhancers Rectal Smooth Muscle rectum
26 chr9:116244800-116248400 Enhancers Fetal Heart heart
27 chr9:116245000-116247800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
28 chr9:116245000-116248800 Enhancers Colon Smooth Muscle Colon
29 chr9:116245000-116249000 Strong transcription Fetal Intestine Large intestine
30 chr9:116245200-116247000 Enhancers Right Atrium heart
31 chr9:116245400-116246800 Enhancers Skeletal Muscle Male skeletal muscle
32 chr9:116245400-116247000 Enhancers Spleen Spleen
33 chr9:116245600-116247000 Enhancers Fetal Muscle Leg muscle
34 chr9:116245600-116247200 Enhancers Ovary ovary
35 chr9:116245800-116246800 Enhancers Brain Inferior Temporal Lobe brain
36 chr9:116245800-116246800 Enhancers Fetal Muscle Trunk muscle
37 chr9:116245800-116246800 Enhancers Placenta Placenta
38 chr9:116245800-116246800 Enhancers Left Ventricle heart
39 chr9:116245800-116247200 Enhancers Fetal Adrenal Gland Adrenal Gland
40 chr9:116245800-116248000 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
41 chr9:116245800-116248400 Enhancers HUVEC blood vessel
42 chr9:116245800-116248800 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
43 chr9:116245800-116248800 Enhancers Right Ventricle heart
44 chr9:116245800-116248800 Enhancers Skeletal Muscle Female skeletal muscle
45 chr9:116246000-116246600 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
46 chr9:116246000-116246600 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
47 chr9:116246000-116246800 Enhancers Brain Anterior Caudate brain
48 chr9:116246000-116247000 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
49 chr9:116246000-116247000 Enhancers Brain Cingulate Gyrus brain
50 chr9:116246000-116247000 Enhancers Brain Hippocampus Middle brain

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