Variant report
| Variant | rs12338221 |
|---|---|
| Chromosome Location | chr9:116253529-116253530 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr9:116227400-116263800 | Weak transcription | Colonic Mucosa | Colon |
| 2 | chr9:116240400-116254600 | Weak transcription | H9 Cell Line | embryonic stem cell |
| 3 | chr9:116242000-116254200 | Weak transcription | Brain Germinal Matrix | brain |
| 4 | chr9:116242000-116254200 | Weak transcription | Fetal Thymus | thymus |
| 5 | chr9:116242000-116255200 | Weak transcription | H1 Cell Line | embryonic stem cell |
| 6 | chr9:116242000-116263600 | Weak transcription | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 7 | chr9:116242000-116266200 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
| 8 | chr9:116242600-116254200 | Weak transcription | Fetal Brain Female | brain |
| 9 | chr9:116246600-116254400 | Weak transcription | Foreskin Melanocyte Primary Cells skin03 | Skin |
| 10 | chr9:116246800-116254800 | Weak transcription | Fetal Muscle Trunk | muscle |
| 11 | chr9:116247000-116253600 | Weak transcription | Fetal Muscle Leg | muscle |
| 12 | chr9:116247000-116254600 | Weak transcription | Ganglion Eminence derived primary cultured neurospheres | brain |
| 13 | chr9:116247000-116254800 | Weak transcription | Stomach Mucosa | stomach |
| 14 | chr9:116247200-116254600 | Weak transcription | Fetal Adrenal Gland | Adrenal Gland |
| 15 | chr9:116248200-116253800 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 16 | chr9:116248200-116259400 | Weak transcription | Gastric | stomach |
| 17 | chr9:116248600-116261600 | Weak transcription | ES-UCSF4 Cell Line | embryonic stem cell |
| 18 | chr9:116248800-116253600 | Weak transcription | Cortex derived primary cultured neurospheres | brain |
| 19 | chr9:116248800-116261600 | Weak transcription | Rectal Mucosa Donor 29 | rectum |
| 20 | chr9:116249000-116254800 | Weak transcription | Primary hematopoietic stem cells short term culture | blood |
| 21 | chr9:116249400-116254600 | Weak transcription | iPS DF 6.9 Cell Line | embryonic stem cell |
| 22 | chr9:116251000-116254600 | Weak transcription | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
| 23 | chr9:116251000-116263800 | Weak transcription | Esophagus | oesophagus |
| 24 | chr9:116251200-116253600 | Weak transcription | Right Ventricle | heart |
| 25 | chr9:116251200-116253800 | Weak transcription | Aorta | Aorta |
| 26 | chr9:116251200-116254200 | Weak transcription | HSMM | muscle |
| 27 | chr9:116251200-116254400 | Weak transcription | IMR90 fetal lung fibroblasts Cell Line | lung |
| 28 | chr9:116251200-116254400 | Weak transcription | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
| 29 | chr9:116251200-116254600 | Weak transcription | Foreskin Melanocyte Primary Cells skin01 | Skin |
| 30 | chr9:116251200-116254600 | Weak transcription | Placenta | Placenta |
| 31 | chr9:116251200-116254600 | Weak transcription | Left Ventricle | heart |
| 32 | chr9:116251200-116254600 | Weak transcription | Lung | lung |
| 33 | chr9:116251200-116254800 | Weak transcription | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
| 34 | chr9:116251200-116263200 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 35 | chr9:116251400-116254400 | Weak transcription | Muscle Satellite Cultured Cells | -- |
| 36 | chr9:116251400-116254400 | Weak transcription | Osteobl | bone |
| 37 | chr9:116251400-116254600 | Weak transcription | Fetal Stomach | stomach |
| 38 | chr9:116251400-116254800 | Weak transcription | ES-WA7 Cell Line | embryonic stem cell |
| 39 | chr9:116251400-116255000 | Weak transcription | Colon Smooth Muscle | Colon |
| 40 | chr9:116251400-116255000 | Weak transcription | HSMMtube | muscle |
| 41 | chr9:116251600-116254400 | Weak transcription | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
| 42 | chr9:116251600-116254600 | Weak transcription | NHDF-Ad | bronchial |
| 43 | chr9:116251600-116283800 | Weak transcription | Hela-S3 | cervix |
| 44 | chr9:116251800-116253600 | Weak transcription | Fetal Heart | heart |
| 45 | chr9:116251800-116254200 | Weak transcription | Right Atrium | heart |
| 46 | chr9:116251800-116254400 | Weak transcription | Stomach Smooth Muscle | stomach |
| 47 | chr9:116251800-116254600 | Weak transcription | NHLF | lung |
| 48 | chr9:116251800-116254800 | Weak transcription | Rectal Mucosa Donor 31 | rectum |
| 49 | chr9:116251800-116261600 | Weak transcription | HepG2 | liver |
| 50 | chr9:116252000-116254600 | Weak transcription | Fetal Intestine Large | intestine |
