Variant report

Variant	rs884899
Chromosome Location	chr9:116330932-116330933
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr9:116330662..116332537-chr9:116332997..116335560,3	K562	blood:
2	chr9:116328408..116331040-chr9:116340149..116343026,2	MCF-7	breast:
3	chr9:116329091..116332362-chr9:116341153..116344066,4	MCF-7	breast:

Variant related genes	Relation type
ENSG00000138835	Chromatin interaction

Extended variants
information (count: 225 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:218)

rs_ID	r²[population]
rs10116799	0.87[EUR][1000 genomes]
rs10125960	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs10217237	0.89[AFR][1000 genomes]
rs10217341	0.80[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs10217750	0.89[AFR][1000 genomes]
rs10217756	0.89[AFR][1000 genomes]
rs10481640	0.89[AFR][1000 genomes]
rs10481676	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs10481677	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs10981789	0.84[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs10981793	0.86[AFR][1000 genomes]
rs10981794	0.86[AFR][1000 genomes]
rs10981803	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs10981807	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs10981808	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs10981814	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs10981815	0.90[AFR][1000 genomes]
rs10981816	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs10981817	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs10981819	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs10981820	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs10981821	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs10981825	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs10981826	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs10981827	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs10981828	0.84[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs10981829	0.84[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs10981830	0.96[AFR][1000 genomes]
rs10981831	0.84[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs10981832	0.94[AFR][1000 genomes];0.93[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs10981834	0.80[AFR][1000 genomes]
rs12335716	0.80[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs12335991	0.89[AFR][1000 genomes]
rs12336719	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs12337340	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12338221	0.87[AFR][1000 genomes]
rs12338588	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs12338697	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12338701	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12339493	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12339501	0.80[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs12339617	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs12339851	0.89[AFR][1000 genomes]
rs12340996	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs12341332	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12341490	0.84[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs12342508	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs12342699	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs12343129	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12343141	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs12343940	0.84[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs12344334	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs12344578	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs12344964	0.89[AFR][1000 genomes]
rs12345524	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs12345968	0.84[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs12346076	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs12346087	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12346939	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs12347382	0.82[AFR][1000 genomes]
rs12347895	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12348214	0.80[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs12348239	0.92[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12349661	0.84[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs12351728	0.86[AFR][1000 genomes]
rs12353541	0.84[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs1890992	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs2050865	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs2050866	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs28594159	0.92[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs28694002	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs28709996	0.89[AFR][1000 genomes]
rs28714985	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs35270441	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs35358414	0.80[EUR][1000 genomes]
rs35533905	0.80[EUR][1000 genomes]
rs3983381	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs41301525	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs41305473	0.99[AFR][1000 genomes];0.96[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs41313331	0.87[EUR][1000 genomes]
rs4596719	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs4979257	0.93[AFR][1000 genomes]
rs55676913	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs55696921	0.84[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs55714377	0.81[AFR][1000 genomes]
rs55777057	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs55805468	0.80[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs55931715	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs55977108	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs56155263	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs56276438	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs56390346	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs61749208	0.96[EUR][1000 genomes]
rs6478011	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs6478016	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs6478017	0.89[AFR][1000 genomes]
rs6478022	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs6478023	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs7018783	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs7020623	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs7021491	0.89[AFR][1000 genomes]
rs7021688	0.84[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs7023661	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs7024445	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs7024612	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs7024996	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs7025170	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs7025745	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs7026568	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs7026656	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs7027024	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs7027340	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs7028327	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs7029685	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs7032311	0.92[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs7033679	0.89[AFR][1000 genomes]
rs7037441	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs7037761	0.84[AFR][1000 genomes]
rs7040031	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs7040635	0.94[AFR][1000 genomes]
rs7041833	0.81[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs7042290	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs7042695	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs7042968	0.93[AFR][1000 genomes]
rs7043140	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs7043571	0.84[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs7045347	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs7046202	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs7046427	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs7047062	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7048208	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7048305	0.87[EUR][1000 genomes]
rs7049221	0.93[AFR][1000 genomes]
rs72760092	0.90[EUR][1000 genomes]
rs72760093	0.89[EUR][1000 genomes]
rs72760096	0.85[AFR][1000 genomes]
rs72760097	0.84[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs72761903	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs72761904	0.84[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs72761905	0.89[AFR][1000 genomes]
rs72761906	0.82[AFR][1000 genomes]
rs72761963	0.82[AFR][1000 genomes]
rs72761964	0.89[AFR][1000 genomes]
rs72761965	0.84[AFR][1000 genomes]
rs72761966	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs72761968	0.80[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs72761969	0.89[AFR][1000 genomes]
rs72761971	0.89[AFR][1000 genomes]
rs72761972	0.80[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs72761973	0.89[AFR][1000 genomes]
rs72761978	0.89[AFR][1000 genomes]
rs72761982	0.80[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs72761985	0.96[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs72761987	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs72761988	0.84[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs72761992	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs72761994	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs72761997	0.80[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs72761999	0.90[AFR][1000 genomes]
rs72762002	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs72763803	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs72763804	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs72763806	0.80[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs72763816	0.80[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs72763826	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72763827	0.84[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs72763828	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72763831	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72763832	0.84[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs72763841	0.96[AFR][1000 genomes]
rs72763842	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72763843	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72763846	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72763848	0.80[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs72763849	0.80[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs72763851	0.80[EUR][1000 genomes]
rs7848203	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs7849841	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs7851718	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs7851937	0.90[AFR][1000 genomes]
rs7852118	0.93[AFR][1000 genomes]
rs7853373	0.96[AFR][1000 genomes];0.92[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs7853792	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs7854197	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs7854524	0.96[AFR][1000 genomes]
rs7855325	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs7855434	0.90[AFR][1000 genomes]
rs7856515	0.96[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs7856689	0.85[AFR][1000 genomes]
rs7857217	0.82[AFR][1000 genomes]
rs7857943	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7859047	0.84[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs7860673	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs7861248	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs7863159	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7864467	0.84[AFR][1000 genomes]
rs7864645	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs7864816	0.86[AFR][1000 genomes]
rs7865364	0.96[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7867353	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs7870142	0.81[AFR][1000 genomes]
rs7870227	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs7870265	0.87[AFR][1000 genomes]
rs7870451	0.89[EUR][1000 genomes]
rs7871186	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7872084	0.90[AFR][1000 genomes];0.89[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs7872192	0.84[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs7872283	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs867375	0.84[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs883025	0.94[AFR][1000 genomes]
rs884898	0.93[AFR][1000 genomes]
rs9299215	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs944345	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs944346	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs9657641	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs9657658	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs9657659	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs9785299	0.96[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:7 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv530949	chr9:115821128-116487796	Flanking Active TSS Enhancers Active TSS Weak transcription Genic enhancers Strong transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	71 gene(s)	inside rSNPs	diseases
2	nsv893747	chr9:116214058-116386438	Enhancers Weak transcription Genic enhancers Bivalent Enhancer Active TSS ZNF genes & repeats Strong transcription Flanking Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	13 gene(s)	inside rSNPs	diseases
3	nsv466508	chr9:116244982-116362738	Strong transcription Enhancers Active TSS Weak transcription Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	9 gene(s)	inside rSNPs	diseases
4	nsv615215	chr9:116244982-116362738	Weak transcription Strong transcription Flanking Active TSS Enhancers Transcr. at gene 5' and 3' Genic enhancers Active TSS Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	9 gene(s)	inside rSNPs	diseases
5	nsv526579	chr9:116244982-116391162	Enhancers Flanking Active TSS Weak transcription Genic enhancers Active TSS Bivalent Enhancer Strong transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	12 gene(s)	inside rSNPs	diseases
6	nsv893748	chr9:116308709-116421786	Flanking Active TSS Enhancers Weak transcription Genic enhancers Strong transcription Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	13 gene(s)	inside rSNPs	diseases
7	nsv430093	chr9:116330446-117325446	Weak transcription Enhancers Strong transcription Flanking Active TSS Bivalent/Poised TSS Active TSS Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	165 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:90 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:116311600-116331600	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
2	chr9:116323200-116334800	Weak transcription	Primary T killer memory cells from peripheral blood	blood
3	chr9:116323200-116339000	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
4	chr9:116323400-116336200	Weak transcription	Primary T cells from cord blood	blood
5	chr9:116323400-116339400	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
6	chr9:116324000-116332800	Genic enhancers	Primary Natural Killer cells fromperipheralblood	blood
7	chr9:116325800-116339800	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
8	chr9:116326200-116339600	Weak transcription	HUVEC	blood vessel
9	chr9:116326600-116331000	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
10	chr9:116326600-116332400	Flanking Active TSS	Stomach Smooth Muscle	stomach
11	chr9:116327800-116331200	Enhancers	Stomach Mucosa	stomach
12	chr9:116328200-116332400	Enhancers	Fetal Muscle Leg	muscle
13	chr9:116328200-116332400	Enhancers	Psoas Muscle	Psoas
14	chr9:116328200-116332800	Enhancers	Placenta	Placenta
15	chr9:116328400-116331400	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
16	chr9:116328400-116331400	Bivalent Enhancer	Fetal Muscle Trunk	muscle
17	chr9:116328400-116331800	Enhancers	Brain Dorsolateral Prefrontal Cortex	brain
18	chr9:116328400-116332400	Enhancers	Right Atrium	heart
19	chr9:116328400-116332800	Enhancers	Esophagus	oesophagus
20	chr9:116328400-116339800	Weak transcription	Primary hematopoietic stem cells	blood
21	chr9:116328600-116331200	Enhancers	Foreskin Melanocyte Primary Cells skin01	Skin
22	chr9:116328600-116331800	Enhancers	Breast Myoepithelial Primary Cells	Breast
23	chr9:116328600-116331800	Genic enhancers	Fetal Stomach	stomach
24	chr9:116328600-116332800	Enhancers	Skeletal Muscle Female	skeletal muscle
25	chr9:116328600-116336600	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
26	chr9:116328600-116339600	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
27	chr9:116328800-116331000	Enhancers	Duodenum Mucosa	Duodenum
28	chr9:116328800-116331800	Enhancers	Brain Angular Gyrus	brain
29	chr9:116328800-116331800	Enhancers	Brain Hippocampus Middle	brain
30	chr9:116328800-116332200	Enhancers	Fetal Brain Male	brain
31	chr9:116328800-116332600	Enhancers	Brain Substantia Nigra	brain
32	chr9:116328800-116332800	Enhancers	Brain Anterior Caudate	brain
33	chr9:116328800-116332800	Enhancers	Left Ventricle	heart
34	chr9:116328800-116332800	Enhancers	Right Ventricle	heart
35	chr9:116328800-116334200	Weak transcription	K562	blood
36	chr9:116328800-116336600	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
37	chr9:116328800-116337000	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
38	chr9:116329000-116331000	Weak transcription	Fetal Brain Female	brain
39	chr9:116329000-116332600	Enhancers	Lung	lung
40	chr9:116329000-116333400	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
41	chr9:116329000-116333800	Enhancers	Fetal Heart	heart
42	chr9:116329000-116339800	Weak transcription	Rectal Mucosa Donor 31	rectum
43	chr9:116329200-116331800	Enhancers	Brain Inferior Temporal Lobe	brain
44	chr9:116329200-116331800	Enhancers	HSMMtube	muscle
45	chr9:116329200-116332200	Strong transcription	Fetal Intestine Small	intestine
46	chr9:116329200-116339800	Weak transcription	Placenta Amnion	Placenta Amnion
47	chr9:116329200-116341600	Weak transcription	Fetal Intestine Large	intestine
48	chr9:116329400-116331000	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
49	chr9:116329400-116331000	Weak transcription	Rectal Mucosa Donor 29	rectum
50	chr9:116329400-116331000	Enhancers	HSMM	muscle

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