Variant report

Variant rs28714985
Chromosome Location chr9:116300767-116300768
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:96 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:116269400-116303000 Weak transcription iPS-20b Cell Line embryonic stem cell
2 chr9:116287000-116311600 Genic enhancers Primary Natural Killer cells fromperipheralblood blood
3 chr9:116287400-116306600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
4 chr9:116287400-116309200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
5 chr9:116287600-116302800 Strong transcription Fetal Intestine Large intestine
6 chr9:116288000-116308600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
7 chr9:116288800-116308200 Strong transcription Primary T regulatory cells fromperipheralblood blood
8 chr9:116288800-116308200 Strong transcription HUVEC blood vessel
9 chr9:116289000-116306600 Strong transcription Primary T helper cells fromperipheralblood blood
10 chr9:116289000-116308400 Strong transcription GM12878-XiMat blood
11 chr9:116289600-116310000 Weak transcription Fetal Kidney kidney
12 chr9:116291000-116310600 Weak transcription HUES48 Cell Line embryonic stem cell
13 chr9:116291600-116310400 Weak transcription H9 Cell Line embryonic stem cell
14 chr9:116292000-116302800 Weak transcription Primary hematopoietic stem cells short term culture blood
15 chr9:116293600-116303600 Weak transcription Hela-S3 cervix
16 chr9:116295400-116303000 Weak transcription A549 lung
17 chr9:116295800-116306000 Genic enhancers Primary T cells fromperipheralblood blood
18 chr9:116296200-116307000 Strong transcription HepG2 liver
19 chr9:116296600-116304000 Weak transcription Small Intestine intestine
20 chr9:116297400-116306600 Strong transcription Primary mononuclear cells fromperipheralblood Blood
21 chr9:116297600-116308400 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
22 chr9:116297800-116300800 Strong transcription Rectal Smooth Muscle rectum
23 chr9:116297800-116301000 Genic enhancers Stomach Smooth Muscle stomach
24 chr9:116297800-116301200 Enhancers Right Atrium heart
25 chr9:116297800-116301600 Strong transcription Sigmoid Colon Sigmoid Colon
26 chr9:116297800-116306200 Enhancers Fetal Heart heart
27 chr9:116297800-116306600 Strong transcription Primary T cells effector/memory enriched fromperipheralblood blood
28 chr9:116298200-116301000 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
29 chr9:116298200-116306400 Strong transcription Primary T helper 17 cells PMA-I stimulated --
30 chr9:116298400-116309400 Strong transcription Primary T cells from cord blood blood
31 chr9:116298600-116301600 Strong transcription Rectal Mucosa Donor 31 rectum
32 chr9:116298600-116301600 Genic enhancers Spleen Spleen
33 chr9:116298600-116304400 Strong transcription Liver Liver
34 chr9:116298800-116300800 Strong transcription Esophagus oesophagus
35 chr9:116298800-116301800 Flanking Active TSS Brain Hippocampus Middle brain
36 chr9:116298800-116310600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
37 chr9:116299000-116301600 Strong transcription Primary T helper naive cells fromperipheralblood blood
38 chr9:116299000-116301600 Strong transcription Fetal Thymus thymus
39 chr9:116299000-116303000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
40 chr9:116299000-116303000 Weak transcription HUES64 Cell Line embryonic stem cell
41 chr9:116299000-116303200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
42 chr9:116299000-116303200 Weak transcription iPS-18 Cell Line embryonic stem cell
43 chr9:116299000-116304800 Strong transcription Fetal Intestine Small intestine
44 chr9:116299000-116310800 Weak transcription ES-WA7 Cell Line embryonic stem cell
45 chr9:116299200-116301200 Enhancers Placenta Placenta
46 chr9:116299200-116302800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
47 chr9:116299200-116302800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
48 chr9:116299200-116302800 Strong transcription Rectal Mucosa Donor 29 rectum
49 chr9:116299200-116303000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
50 chr9:116299200-116305400 Strong transcription Cortex derived primary cultured neurospheres brain

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