Variant report

Variant	rs72761992
Chromosome Location	chr9:116295496-116295497
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:1)
CpG islands
(count:0)
Chromatin interactive
region (count:5)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:1 , 50 per page) page: 1

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	POLR2A	chr9:116294127-116295585	GM12878	blood:	n/a	n/a

No data

(count:5 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr9:116292161..116294607-chr9:116294873..116297808,2	K562	blood:
2	chr9:116295222..116298307-chr9:116341614..116344019,3	MCF-7	breast:
3	chr9:116292438..116296371-chr9:116301107..116304179,5	MCF-7	breast:
4	chr9:116294683..116297585-chr9:116300975..116302682,2	K562	blood:
5	chr9:116294716..116297353-chr9:116298669..116300217,2	K562	blood:

No data

Variant related genes	Relation type
RGS3	TF binding region
ENSG00000138835	Chromatin interaction

Extended variants
information (count: 221 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:216)

rs_ID	r²[population]
rs10116799	0.86[EUR][1000 genomes]
rs10125960	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs10217237	0.93[AFR][1000 genomes]
rs10217341	0.80[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs10217750	0.93[AFR][1000 genomes]
rs10217756	0.93[AFR][1000 genomes]
rs10481640	0.93[AFR][1000 genomes]
rs10481676	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs10481677	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs10981789	0.84[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs10981793	0.90[AFR][1000 genomes]
rs10981794	0.90[AFR][1000 genomes]
rs10981803	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs10981807	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs10981808	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs10981814	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs10981815	0.94[AFR][1000 genomes]
rs10981816	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs10981817	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs10981819	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs10981820	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs10981821	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs10981825	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs10981826	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs10981827	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs10981828	0.84[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs10981829	0.84[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs10981830	0.92[AFR][1000 genomes]
rs10981831	0.84[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs10981832	0.90[AFR][1000 genomes];0.93[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs12335716	0.80[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs12335991	0.93[AFR][1000 genomes]
rs12336719	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12337340	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs12338221	0.91[AFR][1000 genomes]
rs12338588	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12338697	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs12338701	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs12338788	0.83[AFR][1000 genomes]
rs12339493	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs12339501	0.80[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs12339617	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12339851	0.93[AFR][1000 genomes]
rs12340996	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12341332	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs12341490	0.84[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs12342508	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12342699	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12343129	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs12343141	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12343940	0.84[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs12344334	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs12344578	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12344964	0.93[AFR][1000 genomes]
rs12345524	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12345968	0.84[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs12346076	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12346087	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs12346939	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12347382	0.86[AFR][1000 genomes]
rs12347895	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs12348214	0.80[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs12348239	0.92[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs12349661	0.84[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs12351728	0.90[AFR][1000 genomes]
rs12353541	0.84[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs1890992	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs2050865	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs2050866	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs28594159	0.82[AFR][1000 genomes];0.92[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs28694002	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs28709996	0.93[AFR][1000 genomes]
rs28714985	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs35270441	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs3983381	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs41301525	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs41305473	0.94[AFR][1000 genomes];0.96[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs41313331	0.86[EUR][1000 genomes]
rs4596719	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs4979257	0.89[AFR][1000 genomes]
rs55676913	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs55696921	0.84[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs55714377	0.85[AFR][1000 genomes]
rs55777057	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs55805468	0.80[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs55931715	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs55977108	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs56155263	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs56276438	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs56390346	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs61749208	0.91[EUR][1000 genomes]
rs6478011	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs6478016	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs6478017	0.93[AFR][1000 genomes]
rs6478022	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs6478023	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs7018783	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7020623	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7021491	0.93[AFR][1000 genomes]
rs7021688	0.84[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs7023661	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7024445	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs7024612	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs7024996	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs7025170	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs7025745	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7026568	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7026656	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7027024	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7027340	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7028327	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7029685	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7032311	0.92[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs7033679	0.93[AFR][1000 genomes]
rs7037441	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7037761	0.87[AFR][1000 genomes]
rs7040031	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7040635	0.96[AFR][1000 genomes]
rs7041833	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7042290	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7042695	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7042968	0.97[AFR][1000 genomes]
rs7043140	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7043571	0.84[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs7045347	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7046202	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs7046427	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7047062	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs7048208	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs7048305	0.86[EUR][1000 genomes]
rs7049221	0.97[AFR][1000 genomes]
rs72760092	0.89[EUR][1000 genomes]
rs72760093	0.87[EUR][1000 genomes]
rs72760096	0.89[AFR][1000 genomes]
rs72760097	0.84[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs72761903	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs72761904	0.84[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs72761905	0.93[AFR][1000 genomes]
rs72761906	0.86[AFR][1000 genomes]
rs72761963	0.86[AFR][1000 genomes]
rs72761964	0.93[AFR][1000 genomes]
rs72761965	0.87[AFR][1000 genomes]
rs72761966	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72761968	0.80[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs72761969	0.93[AFR][1000 genomes]
rs72761971	0.93[AFR][1000 genomes]
rs72761972	0.80[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs72761973	0.93[AFR][1000 genomes]
rs72761978	0.93[AFR][1000 genomes]
rs72761982	0.80[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs72761985	0.96[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs72761987	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72761988	0.84[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs72761994	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72761997	0.80[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs72761999	0.94[AFR][1000 genomes]
rs72762002	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs72763803	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72763804	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72763806	0.80[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs72763816	0.81[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs72763826	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs72763827	0.84[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs72763828	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs72763831	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs72763832	0.84[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs72763841	0.92[AFR][1000 genomes]
rs72763842	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs72763843	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs72763846	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs72763848	0.80[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs72763849	0.80[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs7848203	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs7849841	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs7851718	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7851937	0.94[AFR][1000 genomes]
rs7852118	0.97[AFR][1000 genomes]
rs7853373	1.00[AFR][1000 genomes];0.92[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7853792	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7854197	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7854524	0.92[AFR][1000 genomes]
rs7855325	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7855434	0.94[AFR][1000 genomes]
rs7856515	0.96[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs7856689	0.89[AFR][1000 genomes]
rs7857217	0.86[AFR][1000 genomes]
rs7857943	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs7859047	0.84[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs7860673	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7861248	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs7863159	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs7864467	0.87[AFR][1000 genomes]
rs7864645	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs7864816	0.90[AFR][1000 genomes]
rs7865364	0.96[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs7867203	0.82[AFR][1000 genomes]
rs7867353	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7870142	0.85[AFR][1000 genomes]
rs7870227	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7870265	0.91[AFR][1000 genomes]
rs7870451	0.81[AFR][1000 genomes];0.87[EUR][1000 genomes]
rs7871186	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs7872084	0.86[AFR][1000 genomes];0.89[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs7872192	0.84[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs7872283	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs867375	0.84[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs883025	0.96[AFR][1000 genomes]
rs884898	0.89[AFR][1000 genomes]
rs884899	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs9299215	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs944345	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs944346	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs9657641	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs9657658	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs9657659	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs9785299	0.92[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:5 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv530949	chr9:115821128-116487796	Flanking Active TSS Enhancers Active TSS Weak transcription Genic enhancers Strong transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	71 gene(s)	inside rSNPs	diseases
2	nsv893747	chr9:116214058-116386438	Enhancers Weak transcription Genic enhancers Bivalent Enhancer Active TSS ZNF genes & repeats Strong transcription Flanking Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	13 gene(s)	inside rSNPs	diseases
3	nsv466508	chr9:116244982-116362738	Strong transcription Enhancers Active TSS Weak transcription Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	9 gene(s)	inside rSNPs	diseases
4	nsv615215	chr9:116244982-116362738	Weak transcription Strong transcription Flanking Active TSS Enhancers Transcr. at gene 5' and 3' Genic enhancers Active TSS Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	9 gene(s)	inside rSNPs	diseases
5	nsv526579	chr9:116244982-116391162	Enhancers Flanking Active TSS Weak transcription Genic enhancers Active TSS Bivalent Enhancer Strong transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	12 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:88 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:116264800-116298400	Weak transcription	Brain Germinal Matrix	brain
2	chr9:116269400-116303000	Weak transcription	iPS-20b Cell Line	embryonic stem cell
3	chr9:116269600-116298400	Weak transcription	H1 Cell Line	embryonic stem cell
4	chr9:116277200-116298600	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
5	chr9:116277600-116298600	Weak transcription	Fetal Brain Female	brain
6	chr9:116282800-116295600	Strong transcription	HepG2	liver
7	chr9:116287000-116311600	Genic enhancers	Primary Natural Killer cells fromperipheralblood	blood
8	chr9:116287400-116306600	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
9	chr9:116287400-116309200	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
10	chr9:116287600-116296800	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
11	chr9:116287600-116302800	Strong transcription	Fetal Intestine Large	intestine
12	chr9:116288000-116299200	Weak transcription	Dnd41	blood
13	chr9:116288000-116308600	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
14	chr9:116288400-116296400	Weak transcription	Small Intestine	intestine
15	chr9:116288800-116296000	Strong transcription	Primary mononuclear cells fromperipheralblood	Blood
16	chr9:116288800-116296000	Weak transcription	Fetal Muscle Leg	muscle
17	chr9:116288800-116298000	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
18	chr9:116288800-116308200	Strong transcription	Primary T regulatory cells fromperipheralblood	blood
19	chr9:116288800-116308200	Strong transcription	HUVEC	blood vessel
20	chr9:116289000-116296600	Genic enhancers	Skeletal Muscle Male	skeletal muscle
21	chr9:116289000-116306600	Strong transcription	Primary T helper cells fromperipheralblood	blood
22	chr9:116289000-116308400	Strong transcription	GM12878-XiMat	blood
23	chr9:116289600-116310000	Weak transcription	Fetal Kidney	kidney
24	chr9:116289800-116298200	Strong transcription	Fetal Intestine Small	intestine
25	chr9:116290000-116295600	Strong transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
26	chr9:116290000-116296600	Strong transcription	Cortex derived primary cultured neurospheres	brain
27	chr9:116290000-116299000	Weak transcription	Duodenum Smooth Muscle	Duodenum
28	chr9:116290200-116297800	Weak transcription	Brain Angular Gyrus	brain
29	chr9:116290400-116296400	Strong transcription	Primary T cells from cord blood	blood
30	chr9:116290400-116296400	Strong transcription	Gastric	stomach
31	chr9:116290600-116297800	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
32	chr9:116290600-116298200	Weak transcription	Fetal Lung	lung
33	chr9:116290800-116295600	Strong transcription	Left Ventricle	heart
34	chr9:116290800-116295600	Weak transcription	Right Atrium	heart
35	chr9:116290800-116297800	Strong transcription	Fetal Stomach	stomach
36	chr9:116290800-116299000	Strong transcription	Duodenum Mucosa	Duodenum
37	chr9:116291000-116298000	Weak transcription	Stomach Mucosa	stomach
38	chr9:116291000-116298600	Weak transcription	Esophagus	oesophagus
39	chr9:116291000-116310600	Weak transcription	HUES48 Cell Line	embryonic stem cell
40	chr9:116291200-116296600	Strong transcription	Sigmoid Colon	Sigmoid Colon
41	chr9:116291200-116297800	Strong transcription	Stomach Smooth Muscle	stomach
42	chr9:116291400-116296600	Strong transcription	Colonic Mucosa	Colon
43	chr9:116291600-116298400	Weak transcription	Thymus	Thymus
44	chr9:116291600-116310400	Weak transcription	H9 Cell Line	embryonic stem cell
45	chr9:116291800-116298200	Weak transcription	HUES6 Cell Line	embryonic stem cell
46	chr9:116291800-116298400	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
47	chr9:116291800-116298400	Strong transcription	Rectal Mucosa Donor 29	rectum
48	chr9:116291800-116299000	Weak transcription	Colon Smooth Muscle	Colon
49	chr9:116292000-116302800	Weak transcription	Primary hematopoietic stem cells short term culture	blood
50	chr9:116292200-116296800	Strong transcription	Fetal Thymus	thymus

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