The 2.0 version of rSNPBase

Variant report

Variant rs72763827
Chromosome Location chr9:116334458-116334459
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:79 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:116323200-116334800 Weak transcription Primary T killer memory cells from peripheral blood blood
2 chr9:116323200-116339000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
3 chr9:116323400-116336200 Weak transcription Primary T cells from cord blood blood
4 chr9:116323400-116339400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
5 chr9:116325800-116339800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
6 chr9:116326200-116339600 Weak transcription HUVEC blood vessel
7 chr9:116328400-116339800 Weak transcription Primary hematopoietic stem cells blood
8 chr9:116328600-116336600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
9 chr9:116328600-116339600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
10 chr9:116328800-116336600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
11 chr9:116328800-116337000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
12 chr9:116329000-116339800 Weak transcription Rectal Mucosa Donor 31 rectum
13 chr9:116329200-116339800 Weak transcription Placenta Amnion Placenta Amnion
14 chr9:116329200-116341600 Weak transcription Fetal Intestine Large intestine
15 chr9:116329400-116335600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
16 chr9:116329400-116336400 Weak transcription Osteobl bone
17 chr9:116329400-116340800 Weak transcription Rectal Smooth Muscle rectum
18 chr9:116330800-116335400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
19 chr9:116330800-116335600 Weak transcription Colonic Mucosa Colon
20 chr9:116331400-116334600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
21 chr9:116331400-116335600 Enhancers Stomach Mucosa stomach
22 chr9:116331800-116334600 Weak transcription Breast Myoepithelial Primary Cells Breast
23 chr9:116331800-116334600 Weak transcription Spleen Spleen
24 chr9:116331800-116336400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
25 chr9:116331800-116336600 Weak transcription NHLF lung
26 chr9:116331800-116340600 Weak transcription Small Intestine intestine
27 chr9:116332000-116340400 Weak transcription Fetal Lung lung
28 chr9:116332200-116334600 Weak transcription Fetal Muscle Trunk muscle
29 chr9:116332400-116335400 Weak transcription Psoas Muscle Psoas
30 chr9:116332400-116336800 Weak transcription Duodenum Mucosa Duodenum
31 chr9:116332400-116339800 Weak transcription Rectal Mucosa Donor 29 rectum
32 chr9:116332600-116334600 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
33 chr9:116332600-116334600 Weak transcription GM12878-XiMat blood
34 chr9:116332600-116334800 Weak transcription Fetal Stomach stomach
35 chr9:116332600-116335400 Enhancers Skeletal Muscle Male skeletal muscle
36 chr9:116332600-116336000 Weak transcription Colon Smooth Muscle Colon
37 chr9:116332600-116336400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
38 chr9:116332600-116338400 Enhancers HMEC breast
39 chr9:116332800-116335000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
40 chr9:116332800-116335200 Weak transcription Brain Anterior Caudate brain
41 chr9:116332800-116335600 Weak transcription Aorta Aorta
42 chr9:116332800-116336600 Weak transcription Esophagus oesophagus
43 chr9:116333400-116334600 Weak transcription Stomach Smooth Muscle stomach
44 chr9:116333400-116336000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
45 chr9:116333400-116340000 Weak transcription Duodenum Smooth Muscle Duodenum
46 chr9:116333800-116336400 Weak transcription Muscle Satellite Cultured Cells --
47 chr9:116333800-116336600 Weak transcription Cortex derived primary cultured neurospheres brain
48 chr9:116334000-116335000 Enhancers HepG2 liver
49 chr9:116334000-116339800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
50 chr9:116334200-116334800 Enhancers IMR90 fetal lung fibroblasts Cell Line lung

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Last update: Aug 31, 2015