Variant report

Variant rs55676913
Chromosome Location chr9:116271425-116271426
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:83 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:116251600-116283800 Weak transcription Hela-S3 cervix
2 chr9:116252400-116273200 Weak transcription Pancreas Pancrea
3 chr9:116255600-116275800 Weak transcription Primary hematopoietic stem cells blood
4 chr9:116259200-116274000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
5 chr9:116259200-116274200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
6 chr9:116262800-116274200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
7 chr9:116264000-116291200 Weak transcription H9 Cell Line embryonic stem cell
8 chr9:116264800-116298400 Weak transcription Brain Germinal Matrix brain
9 chr9:116266600-116274200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
10 chr9:116266800-116273600 Enhancers Right Atrium heart
11 chr9:116266800-116281600 Strong transcription Fetal Stomach stomach
12 chr9:116267000-116272200 Genic enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
13 chr9:116267400-116274800 Genic enhancers Fetal Adrenal Gland Adrenal Gland
14 chr9:116268000-116275000 Genic enhancers HUVEC blood vessel
15 chr9:116268400-116277200 Weak transcription iPS-15b Cell Line embryonic stem cell
16 chr9:116268600-116278600 Weak transcription HUES64 Cell Line embryonic stem cell
17 chr9:116269000-116273200 Weak transcription Psoas Muscle Psoas
18 chr9:116269000-116288600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
19 chr9:116269200-116272000 Genic enhancers Fetal Intestine Large intestine
20 chr9:116269200-116273200 Weak transcription Brain Cingulate Gyrus brain
21 chr9:116269400-116271600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
22 chr9:116269400-116272200 Genic enhancers Cortex derived primary cultured neurospheres brain
23 chr9:116269400-116273600 Genic enhancers HepG2 liver
24 chr9:116269400-116288200 Weak transcription iPS-18 Cell Line embryonic stem cell
25 chr9:116269400-116303000 Weak transcription iPS-20b Cell Line embryonic stem cell
26 chr9:116269600-116276600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
27 chr9:116269600-116298400 Weak transcription H1 Cell Line embryonic stem cell
28 chr9:116269800-116273200 Weak transcription Fetal Brain Male brain
29 chr9:116269800-116276400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
30 chr9:116270000-116274000 Genic enhancers Left Ventricle heart
31 chr9:116270000-116275000 Enhancers Stomach Mucosa stomach
32 chr9:116270200-116272000 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
33 chr9:116270200-116272000 Enhancers Fetal Lung lung
34 chr9:116270200-116272000 Enhancers HSMM muscle
35 chr9:116270400-116271600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
36 chr9:116270400-116271800 Enhancers Small Intestine intestine
37 chr9:116270400-116289200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
38 chr9:116270400-116290600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
39 chr9:116270600-116272200 Enhancers Placenta Placenta
40 chr9:116270600-116274400 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
41 chr9:116270600-116283800 Weak transcription Colon Smooth Muscle Colon
42 chr9:116270600-116283800 Weak transcription Duodenum Smooth Muscle Duodenum
43 chr9:116270800-116272200 Active TSS Rectal Smooth Muscle rectum
44 chr9:116270800-116272200 Enhancers NHLF lung
45 chr9:116270800-116272400 Strong transcription A549 lung
46 chr9:116270800-116273200 Weak transcription Fetal Thymus thymus
47 chr9:116270800-116273400 Weak transcription Primary T helper naive cells from peripheral blood blood
48 chr9:116270800-116274200 Weak transcription Primary hematopoietic stem cells short term culture blood
49 chr9:116270800-116274200 Enhancers Fetal Heart heart
50 chr9:116270800-116276000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell

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