Variant report

Variant	rs56045626
Chromosome Location	chr10:117702086-117702087
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 32 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:32)

rs_ID	r²[population]
rs10490986	0.87[AMR][1000 genomes];0.93[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs10490987	0.92[AMR][1000 genomes];0.95[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs10490988	0.98[EUR][1000 genomes]
rs10787611	0.85[EUR][1000 genomes]
rs10787612	0.85[EUR][1000 genomes]
rs17093786	0.92[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs17269882	0.92[EUR][1000 genomes]
rs17269917	0.92[EUR][1000 genomes]
rs17270580	0.95[EUR][1000 genomes]
rs17270699	0.85[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs17354968	0.83[EUR][1000 genomes]
rs2054533	0.90[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs2249295	0.88[EUR][1000 genomes]
rs2263622	0.88[EUR][1000 genomes]
rs2615880	0.90[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs2615882	0.87[EUR][1000 genomes]
rs2615884	0.85[EUR][1000 genomes]
rs2620959	0.91[EUR][1000 genomes]
rs2620960	0.89[EUR][1000 genomes]
rs2620961	0.88[EUR][1000 genomes]
rs41284364	0.91[EUR][1000 genomes]
rs55782493	0.92[AMR][1000 genomes];0.95[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs55917752	0.83[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs57211763	0.83[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs58744761	0.92[AMR][1000 genomes];0.95[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs61319078	0.92[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs67778998	0.85[AMR][1000 genomes];0.93[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs67945700	0.87[AMR][1000 genomes];0.92[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs72832833	0.86[EUR][1000 genomes]
rs72832834	0.91[EUR][1000 genomes]
rs72832836	0.92[EUR][1000 genomes]
rs73365760	0.92[AMR][1000 genomes];0.95[EUR][1000 genomes];0.87[ASN][1000 genomes]

No data

Chromatin state (count:27 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:117693800-117708600	Weak transcription	Fetal Muscle Leg	muscle
2	chr10:117697200-117704000	Weak transcription	A549	lung
3	chr10:117697600-117704800	Weak transcription	HSMM	muscle
4	chr10:117697600-117705200	Weak transcription	NH-A	brain
5	chr10:117700400-117702600	Enhancers	NHLF	lung
6	chr10:117700400-117702800	Enhancers	Fetal Lung	lung
7	chr10:117700600-117702200	Enhancers	Muscle Satellite Cultured Cells	--
8	chr10:117700600-117702200	Enhancers	Fetal Stomach	stomach
9	chr10:117700600-117702400	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
10	chr10:117700600-117702600	Enhancers	NHDF-Ad	bronchial
11	chr10:117700800-117702200	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
12	chr10:117700800-117702400	Enhancers	Osteobl	bone
13	chr10:117701000-117702400	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
14	chr10:117701000-117703800	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
15	chr10:117701200-117702400	Enhancers	HUVEC	blood vessel
16	chr10:117701200-117704000	Weak transcription	NHEK	skin
17	chr10:117701400-117705200	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
18	chr10:117701600-117702400	Enhancers	Fetal Heart	heart
19	chr10:117701600-117705200	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
20	chr10:117701600-117705400	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
21	chr10:117701800-117702200	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
22	chr10:117701800-117702200	Enhancers	Ovary	ovary
23	chr10:117701800-117702400	Enhancers	Fetal Kidney	kidney
24	chr10:117701800-117703000	Enhancers	Fetal Adrenal Gland	Adrenal Gland
25	chr10:117701800-117704800	Weak transcription	HSMMtube	muscle
26	chr10:117702000-117702400	Weak transcription	Colon Smooth Muscle	Colon
27	chr10:117702000-117702400	Enhancers	Hela-S3	cervix

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