Variant report
| Variant | rs56098630 |
|---|---|
| Chromosome Location | chr4:79557399-79557400 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr4:79548800-79557400 | Enhancers | Breast Myoepithelial Primary Cells | Breast |
| 2 | chr4:79549600-79560000 | Weak transcription | HMEC | breast |
| 3 | chr4:79550400-79564200 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 4 | chr4:79551400-79558400 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
| 5 | chr4:79551400-79578200 | Weak transcription | H1 BMP4 Derived Mesendoderm Cultured Cells | ES cell derived |
| 6 | chr4:79553000-79561600 | Weak transcription | Placenta | Placenta |
| 7 | chr4:79553200-79559200 | Weak transcription | Primary monocytes fromperipheralblood | blood |
| 8 | chr4:79553200-79559200 | Weak transcription | Monocytes-CD14+_RO01746 | blood |
| 9 | chr4:79553200-79563000 | Weak transcription | Placenta Amnion | Placenta Amnion |
| 10 | chr4:79554000-79558600 | Weak transcription | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
| 11 | chr4:79554000-79561600 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 12 | chr4:79555200-79558800 | Weak transcription | Primary T cells from cord blood | blood |
| 13 | chr4:79555400-79558800 | Weak transcription | Primary hematopoietic stem cells G-CSF-mobilized Female | -- |
| 14 | chr4:79555400-79562000 | Weak transcription | Brain Substantia Nigra | brain |
| 15 | chr4:79555600-79558400 | Weak transcription | Primary B cells from peripheral blood | blood |
| 16 | chr4:79555600-79558400 | Weak transcription | GM12878-XiMat | blood |
| 17 | chr4:79555600-79558800 | Weak transcription | K562 | blood |
| 18 | chr4:79555600-79559000 | Weak transcription | Primary hematopoietic stem cells short term culture | blood |
| 19 | chr4:79555600-79564000 | Weak transcription | Fetal Intestine Large | intestine |
| 20 | chr4:79555800-79566400 | Weak transcription | Ganglion Eminence derived primary cultured neurospheres | brain |
| 21 | chr4:79556000-79564000 | Weak transcription | Brain Hippocampus Middle | brain |
| 22 | chr4:79557000-79557600 | Enhancers | Cortex derived primary cultured neurospheres | brain |
| 23 | chr4:79557200-79557600 | Enhancers | Brain Anterior Caudate | brain |
| 24 | chr4:79557200-79568000 | Enhancers | Primary B cells from cord blood | blood |
