Variant report

Variant	rs56107750
Chromosome Location	chr2:37652305-37652306
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 15 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:14)

rs_ID	r²[population]
rs10173794	0.86[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs10490445	0.80[ASN][1000 genomes]
rs12617664	0.90[ASN][1000 genomes]
rs12620578	0.90[ASN][1000 genomes]
rs17020706	0.90[ASN][1000 genomes]
rs2058717	0.93[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4670198	0.80[ASN][1000 genomes]
rs4670704	0.93[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs4670708	0.91[ASN][1000 genomes]
rs59560107	0.81[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs7567553	0.80[ASN][1000 genomes]
rs7587134	0.83[AFR][1000 genomes];0.81[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs870803	0.80[ASN][1000 genomes]
rs870804	0.80[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv833814	chr2:37643132-37840247	Active TSS Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Bivalent Enhancer Strong transcription Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:37651800-37654400	Enhancers	Fetal Heart	heart
2	chr2:37652200-37652400	Enhancers	Left Ventricle	heart

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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