Variant report

Variant	rs4670708
Chromosome Location	chr2:37642891-37642892
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr2:37641113..37643147-chr2:38035425..38037693,2	MCF-7	breast:
2	chr2:37636169..37638142-chr2:37642427..37644282,2	K562	blood:
3	chr2:37641385..37643169-chr2:38059236..38060312,7	MCF-7	breast:

Extended variants
information (count: 22 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:22)

rs_ID	r²[population]
rs10173794	0.89[ASN][1000 genomes]
rs10490445	0.82[ASN][1000 genomes]
rs11886889	0.95[AMR][1000 genomes]
rs12615162	0.86[AMR][1000 genomes]
rs12617664	0.90[AFR][1000 genomes];0.86[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs12620578	0.95[AFR][1000 genomes];0.86[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs17020706	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.89[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs2058717	0.95[ASN][1000 genomes]
rs4670198	0.82[ASN][1000 genomes]
rs4670703	0.81[ASN][1000 genomes]
rs4670709	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs56107750	0.91[ASN][1000 genomes]
rs59560107	0.97[ASN][1000 genomes]
rs59966191	0.81[ASN][1000 genomes]
rs72792862	0.91[AMR][1000 genomes]
rs72792863	0.91[AMR][1000 genomes]
rs72792867	0.83[ASN][1000 genomes]
rs7564835	0.80[ASN][1000 genomes]
rs7567553	0.82[ASN][1000 genomes]
rs7587134	0.96[ASN][1000 genomes]
rs870803	0.82[ASN][1000 genomes]
rs870804	0.82[ASN][1000 genomes]

No data

Chromatin state (count:32 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:37640600-37643000	Enhancers	Stomach Smooth Muscle	stomach
2	chr2:37641400-37643200	Enhancers	Muscle Satellite Cultured Cells	--
3	chr2:37641600-37643200	Enhancers	Primary monocytes fromperipheralblood	blood
4	chr2:37641600-37643200	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
5	chr2:37641800-37643200	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
6	chr2:37641800-37643200	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
7	chr2:37641800-37643200	Enhancers	HUVEC	blood vessel
8	chr2:37641800-37643200	Enhancers	NHDF-Ad	bronchial
9	chr2:37641800-37643400	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
10	chr2:37641800-37643600	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
11	chr2:37641800-37643800	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
12	chr2:37641800-37645600	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
13	chr2:37642000-37643000	Enhancers	Foreskin Fibroblast Primary Cells skin02	Skin
14	chr2:37642000-37643200	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
15	chr2:37642000-37643400	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
16	chr2:37642200-37643000	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
17	chr2:37642200-37644400	Weak transcription	NH-A	brain
18	chr2:37642200-37649000	Weak transcription	Fetal Lung	lung
19	chr2:37642400-37644200	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
20	chr2:37642400-37644400	Weak transcription	HSMMtube	muscle
21	chr2:37642400-37644600	Weak transcription	Fetal Muscle Leg	muscle
22	chr2:37642400-37645600	Enhancers	Fetal Heart	heart
23	chr2:37642400-37648800	Weak transcription	Fetal Kidney	kidney
24	chr2:37642600-37643800	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
25	chr2:37642600-37644200	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
26	chr2:37642600-37644200	Weak transcription	HSMM	muscle
27	chr2:37642600-37644400	Weak transcription	Rectal Smooth Muscle	rectum
28	chr2:37642600-37648800	Weak transcription	Fetal Stomach	stomach
29	chr2:37642800-37643200	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
30	chr2:37642800-37643600	Enhancers	K562	blood
31	chr2:37642800-37644200	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
32	chr2:37642800-37644200	Weak transcription	Osteobl	bone

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