The 2.0 version of rSNPBase

Variant report

Variant rs56109512
Chromosome Location chr3:46140654-46140655
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:50 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:46129200-46147400 Enhancers Primary monocytes fromperipheralblood blood
2 chr3:46129400-46154200 Enhancers Primary Natural Killer cells fromperipheralblood blood
3 chr3:46130200-46141200 Enhancers Primary B cells from peripheral blood blood
4 chr3:46130600-46143000 Enhancers Primary hematopoietic stem cells short term culture blood
5 chr3:46131400-46152200 Weak transcription Pancreas Pancrea
6 chr3:46136800-46143200 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
7 chr3:46137400-46142600 Enhancers Primary T cells fromperipheralblood blood
8 chr3:46137600-46141000 Enhancers Primary T helper cells fromperipheralblood blood
9 chr3:46137600-46141200 Enhancers Primary T killer memory cells from peripheral blood blood
10 chr3:46138000-46140800 Enhancers Placenta Placenta
11 chr3:46138000-46141000 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
12 chr3:46138000-46141200 Enhancers Primary T helper memory cells from peripheral blood 2 blood
13 chr3:46138200-46142800 Flanking Active TSS Primary neutrophils fromperipheralblood blood
14 chr3:46138400-46141000 Enhancers Primary T regulatory cells fromperipheralblood blood
15 chr3:46138800-46140800 Enhancers Small Intestine intestine
16 chr3:46138800-46141000 Enhancers Primary T helper naive cells fromperipheralblood blood
17 chr3:46138800-46141000 Enhancers Primary T killer naive cells fromperipheralblood blood
18 chr3:46138800-46141000 Enhancers Fetal Intestine Large intestine
19 chr3:46138800-46141000 Enhancers Osteobl bone
20 chr3:46139000-46140800 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
21 chr3:46139000-46140800 Enhancers Rectal Mucosa Donor 31 rectum
22 chr3:46139000-46140800 Enhancers Thymus Thymus
23 chr3:46139200-46140800 Enhancers Duodenum Mucosa Duodenum
24 chr3:46139200-46150600 Weak transcription Lung lung
25 chr3:46139400-46141000 Enhancers Primary T helper 17 cells PMA-I stimulated --
26 chr3:46139600-46140800 Flanking Active TSS Primary B cells from cord blood blood
27 chr3:46139800-46141200 Flanking Active TSS Monocytes-CD14+_RO01746 blood
28 chr3:46140000-46140800 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
29 chr3:46140000-46141200 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
30 chr3:46140000-46141200 Enhancers Primary T helper naive cells from peripheral blood blood
31 chr3:46140000-46141200 Enhancers Primary T helper cells PMA-I stimulated --
32 chr3:46140200-46141200 Enhancers Primary T helper memory cells from peripheral blood 1 blood
33 chr3:46140400-46141000 Enhancers Primary T cells from cord blood blood
34 chr3:46140400-46141000 Enhancers Rectal Mucosa Donor 29 rectum
35 chr3:46140400-46141600 Weak transcription Adipose Nuclei Adipose
36 chr3:46140400-46142000 Enhancers Dnd41 blood
37 chr3:46140400-46142600 Enhancers Fetal Thymus thymus
38 chr3:46140400-46143400 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
39 chr3:46140400-46144000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
40 chr3:46140400-46144400 Weak transcription Skeletal Muscle Male skeletal muscle
41 chr3:46140400-46146000 Weak transcription Placenta Amnion Placenta Amnion
42 chr3:46140400-46149200 Weak transcription NHLF lung
43 chr3:46140400-46150000 Weak transcription Skeletal Muscle Female skeletal muscle
44 chr3:46140600-46142200 Enhancers Primary hematopoietic stem cells blood
45 chr3:46140600-46142600 Enhancers GM12878-XiMat blood
46 chr3:46140600-46144000 Weak transcription NHDF-Ad bronchial
47 chr3:46140600-46144200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
48 chr3:46140600-46146200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
49 chr3:46140600-46150000 Weak transcription Hela-S3 cervix
50 chr3:46140600-46150000 Weak transcription HMEC breast

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Last update: Aug 31, 2015