The 2.0 version of rSNPBase

Variant report

Variant rs56146024
Chromosome Location chr17:46472449-46472450
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:24 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr17:46462400-46474200 Strong transcription Primary Natural Killer cells fromperipheralblood blood
2 chr17:46466000-46474600 Strong transcription Primary T cells fromperipheralblood blood
3 chr17:46469200-46476800 Weak transcription Primary T killer memory cells from peripheral blood blood
4 chr17:46470400-46473600 Strong transcription Fetal Thymus thymus
5 chr17:46470600-46474200 Strong transcription Primary T helper 17 cells PMA-I stimulated --
6 chr17:46470600-46474200 Strong transcription GM12878-XiMat blood
7 chr17:46470600-46479200 Strong transcription Primary T regulatory cells fromperipheralblood blood
8 chr17:46471600-46475800 Strong transcription Primary T cells effector/memory enriched fromperipheralblood blood
9 chr17:46471800-46473200 Genic enhancers Primary T killer naive cells fromperipheralblood blood
10 chr17:46471800-46473200 Strong transcription Thymus Thymus
11 chr17:46471800-46474200 Strong transcription Primary B cells from peripheral blood blood
12 chr17:46472000-46472600 Strong transcription Primary T helper memory cells from peripheral blood 1 blood
13 chr17:46472000-46474600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
14 chr17:46472200-46472600 Enhancers Primary hematopoietic stem cells short term culture blood
15 chr17:46472200-46472800 Enhancers Primary T helper naive cells from peripheral blood blood
16 chr17:46472200-46472800 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
17 chr17:46472200-46473400 Genic enhancers Primary T helper cells fromperipheralblood blood
18 chr17:46472200-46473800 Genic enhancers Primary T helper cells PMA-I stimulated --
19 chr17:46472400-46472600 Genic enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
20 chr17:46472400-46472600 Bivalent Enhancer Fetal Brain Male brain
21 chr17:46472400-46472600 Flanking Bivalent TSS/Enh Fetal Lung lung
22 chr17:46472400-46472800 Enhancers Primary T helper memory cells from peripheral blood 2 blood
23 chr17:46472400-46473200 Genic enhancers Primary T cells from cord blood blood
24 chr17:46472400-46473200 Genic enhancers Primary T helper naive cells fromperipheralblood blood

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Last update: Aug 31, 2015