Variant report

Variant	rs562780928
Chromosome Location	chr19:53324218-53324219
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:25)
CpG islands
(count:61)
Chromatin interactive
region (count:2)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:25 , 50 per page) page: 1

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	POLR2A	chr19:53324215-53324490	HepG2	liver:	n/a	n/a
2	POLR2A	chr19:53324160-53325121	GM12878	blood:	n/a	n/a
3	POLR2A	chr19:53324202-53325067	GM19193	blood:	n/a	n/a
4	POLR2A	chr19:53324103-53325115	GM12891	blood:	n/a	n/a
5	POLR2A	chr19:53324201-53324298	GM12878	blood:	n/a	n/a
6	POLR2A	chr19:53324153-53325114	GM12892	blood:	n/a	n/a
7	POLR2A	chr19:53324208-53325176	PANC-1	pancreas:	n/a	n/a
8	POLR2A	chr19:53324189-53324579	GM12878	blood:	n/a	n/a
9	UBTF	chr19:53324125-53324320	K562	blood:	n/a	n/a
10	POLR2A	chr19:53324172-53325119	SK-N-MC	brain:	n/a	n/a
11	ELF1	chr19:53324122-53325153	GM12878	blood:	n/a	chr19:53325007-53325019
12	POLR2A	chr19:53324114-53325097	GM12891	blood:	n/a	n/a
13	E2F6	chr19:53324163-53324362	K562	blood:	n/a	n/a
14	POLR2A	chr19:53323630-53325114	GM12878	blood:	n/a	n/a
15	HEY1	chr19:53323617-53325058	K562	blood:	n/a	n/a
16	POU2F2	chr19:53324108-53324936	GM12891	blood:	n/a	chr19:53324252-53324264
17	POLR2A	chr19:53323572-53325125	GM12892	blood:	n/a	n/a
18	MAX	chr19:53324046-53324376	K562	blood:	n/a	n/a
19	POLR2A	chr19:53324185-53325246	K562	blood:	n/a	n/a
20	POU2F2	chr19:53324133-53325113	GM12891	blood:	n/a	chr19:53324252-53324264
21	POLR2A	chr19:53324095-53325136	H1-hESC	embryonic stem cell:	n/a	n/a
22	POLR2A	chr19:53323672-53325137	GM12892	blood:	n/a	n/a
23	MXI1	chr19:53323964-53325421	SK-N-SH	brain:	n/a	n/a
24	POLR2A	chr19:53324169-53325206	MCF-7	breast:	n/a	n/a
25	POLR2A	chr19:53323555-53325123	GM12878	blood:	n/a	n/a

(count:61 , 50 per page) page: 1 2

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr19:53324198-53324248	PFSK-1	brain:	n/a
2	chr19:53324198-53324248	MCF10A-Er-Src	breast:	n/a
3	chr19:53324198-53324248	HPAEpiC	pulmonary alveolar:	n/a
4	chr19:53324198-53324248	HUVEC	blood vessel:	n/a
5	chr19:53324198-53324248	HepG2	liver:	n/a
6	chr19:53324198-53324248	HCF	heart:	n/a
7	chr19:53324198-53324248	NH-A	brain:	n/a
8	chr19:53324198-53324248	HRE	kidney:	n/a
9	chr19:53324198-53324248	SK-N-SH_RA	brain:	n/a
10	chr19:53324198-53324248	H1-hESC	embryonic stem cell:	embryo
11	chr19:53324198-53324248	ECC-1	luminal epithelium:	n/a
12	chr19:53324198-53324248	MCF-7	breast:	n/a
13	chr19:53324198-53324248	RPTEC	kidney:	n/a
14	chr19:53324198-53324248	AoSMC	blood vessel:	n/a
15	chr19:53324198-53324248	T-47D	breast:	n/a
16	chr19:53324198-53324248	ProgFib	skin:	n/a
17	chr19:53324198-53324248	Caco-2	colon:	n/a
18	chr19:53324198-53324248	PrEC	prostate:	n/a
19	chr19:53324198-53324248	Hela-S3	cervix:	n/a
20	chr19:53324198-53324248	AG09309	skin:	n/a
21	chr19:53324198-53324248	GM12891	blood:	n/a
22	chr19:53324198-53324248	AG04449	skin:	fetal
23	chr19:53324198-53324248	HIPEpiC	eye:	n/a
24	chr19:53324198-53324248	HRCEpiC	kidney:	n/a
25	chr19:53324198-53324248	Jurkat	blood:	n/a
26	chr19:53324198-53324248	HCM	heart:	n/a
27	chr19:53324198-53324248	GM12892	blood:	n/a
28	chr19:53324198-53324248	U87	brain:	n/a
29	chr19:53324198-53324248	BJ	skin:	n/a
30	chr19:53324198-53324248	PANC-1	pancreas:	n/a
31	chr19:53324198-53324248	SK-N-MC	brain:	n/a
32	chr19:53324198-53324248	HCT-116	colon:	n/a
33	chr19:53324198-53324248	GM12878	blood:	n/a
34	chr19:53324198-53324248	HRPEpiC	eye:	n/a
35	chr19:53324198-53324248	A549	lung:	n/a
36	chr19:53324198-53324248	HEEpiC	esophagus:	n/a
37	chr19:53324198-53324248	AG09319	gingival:	n/a
38	chr19:53324198-53324248	HCPEpiC	choroid plexus:	n/a
39	chr19:53324198-53324248	SKMC	muscle:	n/a
40	chr19:53324198-53324248	NB4	blood:	n/a
41	chr19:53324198-53324248	SAEC	small airway:	n/a
42	chr19:53324198-53324248	LNCaP	prostate:	n/a
43	chr19:53324198-53324248	CMK	blood:	n/a
44	chr19:53324198-53324248	Hepatocyte	liver:	n/a
45	chr19:53324198-53324248	SK-N-SH	brain:	n/a
46	chr19:53324198-53324248	HAEpiC	amniotic membrane:	n/a
47	chr19:53324198-53324248	ovcar-3	ovarian:	n/a
48	chr19:53324198-53324248	AG10803	skin:	n/a
49	chr19:53324198-53324248	GM06990	blood:	n/a
50	chr19:53324198-53324248	K562	blood:	n/a

(count:2 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr19:53322321..53326212-chr19:53359240..53361245,4	K562	blood:
2	chr19:53322321..53326212-chr19:53359321..53361245,3	K562	blood:

No data

Variant related genes	Relation type
ZNF28	TF binding region
ZNF28	CpG island
ENSG00000204604	Chromatin interaction
ENSG00000198538	Chromatin interaction

Extended variants
information (count: 76 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:76 , 50 per page) page: 1 2

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1057296	chr19:52950339-53396986	Weak transcription Active TSS ZNF genes & repeats Strong transcription Enhancers Flanking Active TSS Transcr. at gene 5' and 3' Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	34 gene(s)	inside rSNPs	diseases
2	nsv912305	chr19:53092465-53349850	Strong transcription ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh Flanking Active TSS Active TSS Enhancers Weak transcription Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	25 gene(s)	inside rSNPs	diseases
3	nsv912306	chr19:53092465-53400760	Enhancers Flanking Active TSS ZNF genes & repeats Strong transcription Weak transcription Genic enhancers Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	31 gene(s)	inside rSNPs	diseases
4	nsv912307	chr19:53092465-53433054	Weak transcription Active TSS ZNF genes & repeats Flanking Active TSS Enhancers Strong transcription Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	32 gene(s)	inside rSNPs	diseases
5	nsv912308	chr19:53092465-53436337	Enhancers Strong transcription Flanking Active TSS Weak transcription Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Genic enhancers Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	32 gene(s)	inside rSNPs	diseases
6	nsv912309	chr19:53092465-53440653	Weak transcription Active TSS Enhancers Genic enhancers Strong transcription ZNF genes & repeats Flanking Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	32 gene(s)	inside rSNPs	diseases
7	nsv912310	chr19:53092465-53451291	Weak transcription Flanking Active TSS Strong transcription Active TSS ZNF genes & repeats Enhancers Genic enhancers Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	33 gene(s)	inside rSNPs	diseases
8	nsv912313	chr19:53103875-53436337	ZNF genes & repeats Weak transcription Strong transcription Active TSS Enhancers Flanking Active TSS Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	30 gene(s)	inside rSNPs	diseases
9	nsv912317	chr19:53105547-53440653	Weak transcription Active TSS Enhancers Strong transcription ZNF genes & repeats Flanking Active TSS Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	30 gene(s)	inside rSNPs	diseases
10	nsv1066762	chr19:53112568-53552217	Enhancers Weak transcription Bivalent/Poised TSS Strong transcription Active TSS ZNF genes & repeats Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	36 gene(s)	inside rSNPs	diseases
11	nsv912318	chr19:53118278-53451291	Strong transcription ZNF genes & repeats Weak transcription Active TSS Enhancers Flanking Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	26 gene(s)	inside rSNPs	diseases
12	esv3489404	chr19:53121944-53391394	ZNF genes & repeats Weak transcription Enhancers Strong transcription Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent/Poised TSS Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	23 gene(s)	inside rSNPs	diseases
13	esv3489405	chr19:53121944-53391394	Weak transcription Flanking Active TSS ZNF genes & repeats Strong transcription Genic enhancers Enhancers Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	23 gene(s)	inside rSNPs	diseases
14	nsv432072	chr19:53144788-53554388	Strong transcription ZNF genes & repeats Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh Enhancers Bivalent/Poised TSS Active TSS Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	34 gene(s)	inside rSNPs	diseases
15	esv3401212	chr19:53151131-53482063	Active TSS Enhancers Flanking Active TSS Weak transcription ZNF genes & repeats Strong transcription Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	27 gene(s)	inside rSNPs	diseases
16	nsv912321	chr19:53186836-53451291	Weak transcription ZNF genes & repeats Enhancers Strong transcription Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer Genic enhancers Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	24 gene(s)	inside rSNPs	diseases
17	nsv1058903	chr19:53193570-53489633	Weak transcription Active TSS Enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Strong transcription Flanking Active TSS Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	27 gene(s)	inside rSNPs	diseases
18	nsv1067280	chr19:53193570-53567287	Active TSS Strong transcription Weak transcription ZNF genes & repeats Flanking Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Enhancers Transcr. at gene 5' and 3' Genic enhancers Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	33 gene(s)	inside rSNPs	diseases
19	nsv544062	chr19:53193570-53567287	ZNF genes & repeats Weak transcription Flanking Active TSS Enhancers Strong transcription Active TSS Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	33 gene(s)	inside rSNPs	diseases
20	nsv580030	chr19:53194344-53547394	Weak transcription Active TSS Strong transcription Enhancers Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	32 gene(s)	inside rSNPs	diseases
21	nsv1057118	chr19:53195426-53480449	Strong transcription Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats Enhancers Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	25 gene(s)	inside rSNPs	diseases
22	nsv530807	chr19:53210488-53695881	Strong transcription Active TSS Weak transcription ZNF genes & repeats Enhancers Flanking Active TSS Bivalent Enhancer Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	43 gene(s)	inside rSNPs	diseases
23	nsv833875	chr19:53211335-53391459	Enhancers Strong transcription Active TSS Weak transcription ZNF genes & repeats Genic enhancers Flanking Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	19 gene(s)	inside rSNPs	diseases
24	nsv961240	chr19:53242965-53395960	Weak transcription Active TSS Strong transcription Flanking Active TSS ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh Enhancers Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	17 gene(s)	inside rSNPs	diseases
25	nsv912323	chr19:53249347-53451291	ZNF genes & repeats Flanking Active TSS Weak transcription Enhancers Active TSS Strong transcription Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	20 gene(s)	inside rSNPs	diseases
26	nsv1066277	chr19:53261575-53364138	ZNF genes & repeats Weak transcription Strong transcription Flanking Active TSS Enhancers Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Genic enhancers Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	15 gene(s)	inside rSNPs	diseases
27	nsv1061781	chr19:53263785-53364138	Strong transcription Enhancers ZNF genes & repeats Flanking Active TSS Active TSS Weak transcription Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	15 gene(s)	inside rSNPs	diseases
28	nsv1061149	chr19:53266861-53364138	ZNF genes & repeats Weak transcription Enhancers Strong transcription Active TSS Flanking Active TSS Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	15 gene(s)	inside rSNPs	diseases
29	nsv458746	chr19:53288873-53357911	Active TSS Weak transcription Enhancers Strong transcription ZNF genes & repeats Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	8 gene(s)	inside rSNPs	diseases
30	nsv580032	chr19:53288873-53357911	Transcr. at gene 5' and 3' ZNF genes & repeats Flanking Active TSS Bivalent/Poised TSS Weak transcription Active TSS Strong transcription Flanking Bivalent TSS/Enh Enhancers Genic enhancers Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	8 gene(s)	inside rSNPs	diseases
31	esv3431689	chr19:53291230-53483998	Strong transcription ZNF genes & repeats Enhancers Flanking Active TSS Active TSS Weak transcription Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Genic enhancers Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	20 gene(s)	inside rSNPs	diseases
32	nsv870040	chr19:53291253-53375097	ZNF genes & repeats Flanking Active TSS Weak transcription Enhancers Strong transcription Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	13 gene(s)	inside rSNPs	diseases
33	nsv580033	chr19:53297766-53374032	Weak transcription Flanking Active TSS ZNF genes & repeats Strong transcription Enhancers Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	13 gene(s)	inside rSNPs	diseases
34	esv2445065	chr19:53299964-53342395	Enhancers ZNF genes & repeats Weak transcription Flanking Active TSS Strong transcription Active TSS Transcr. at gene 5' and 3' Genic enhancers Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	6 gene(s)	inside rSNPs	diseases
35	esv3356530	chr19:53301807-53342968	ZNF genes & repeats Weak transcription Strong transcription Flanking Active TSS Enhancers Active TSS Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
36	nsv817858	chr19:53302481-53357911	ZNF genes & repeats Strong transcription Weak transcription Active TSS Enhancers Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases
37	nsv458747	chr19:53302481-53424324	ZNF genes & repeats Weak transcription Strong transcription Active TSS Genic enhancers Enhancers Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	14 gene(s)	inside rSNPs	diseases
38	nsv580034	chr19:53302481-53424324	Weak transcription Active TSS ZNF genes & repeats Strong transcription Flanking Active TSS Enhancers Transcr. at gene 5' and 3' Genic enhancers Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	14 gene(s)	inside rSNPs	diseases
39	nsv912324	chr19:53302622-53358889	Strong transcription Weak transcription Enhancers ZNF genes & repeats Active TSS Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases
40	nsv912325	chr19:53302622-53367392	Weak transcription ZNF genes & repeats Flanking Active TSS Active TSS Strong transcription Transcr. at gene 5' and 3' Enhancers Genic enhancers Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases
41	nsv528436	chr19:53302622-53374032	Enhancers Genic enhancers Weak transcription Flanking Active TSS Strong transcription ZNF genes & repeats Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases
42	nsv1060555	chr19:53309888-53353657	Enhancers ZNF genes & repeats Strong transcription Weak transcription Transcr. at gene 5' and 3' Active TSS Flanking Active TSS Bivalent/Poised TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
43	esv2757700	chr19:53310712-53345321	ZNF genes & repeats Strong transcription Weak transcription Flanking Active TSS Active TSS Enhancers Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
44	esv2758768	chr19:53310712-53345321	Weak transcription Flanking Active TSS Enhancers Active TSS ZNF genes & repeats Strong transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
45	nsv912326	chr19:53311563-53374032	ZNF genes & repeats Weak transcription Strong transcription Enhancers Flanking Active TSS Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	12 gene(s)	inside rSNPs	diseases
46	esv3451710	chr19:53313190-53324688	Enhancers ZNF genes & repeats Flanking Active TSS Active TSS Strong transcription Weak transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
47	esv1009469	chr19:53313866-53324346	Active TSS Weak transcription ZNF genes & repeats Flanking Active TSS Strong transcription Enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
48	nsv912327	chr19:53316266-53349850	Flanking Active TSS Active TSS ZNF genes & repeats Strong transcription Weak transcription Enhancers Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
49	nsv1061113	chr19:53316328-53357173	Weak transcription Strong transcription Active TSS ZNF genes & repeats Enhancers Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
50	nsv1060400	chr19:53316328-53362705	ZNF genes & repeats Weak transcription Flanking Active TSS Strong transcription Active TSS Enhancers Transcr. at gene 5' and 3' Genic enhancers Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:127 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr19:53323600-53324400	Flanking Active TSS	Dnd41	blood
2	chr19:53323600-53324600	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--
3	chr19:53323600-53325000	Active TSS	ES-I3 Cell Line	embryonic stem cell
4	chr19:53323600-53325000	Active TSS	HUES6 Cell Line	embryonic stem cell
5	chr19:53323600-53325000	Active TSS	iPS-15b Cell Line	embryonic stem cell
6	chr19:53323600-53325000	Active TSS	Primary T cells effector/memory enriched fromperipheralblood	blood
7	chr19:53323600-53325200	Active TSS	Primary hematopoietic stem cells short term culture	blood
8	chr19:53323600-53325200	Active TSS	Foreskin Fibroblast Primary Cells skin01	Skin
9	chr19:53323600-53325400	Active TSS	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
10	chr19:53323600-53325400	Active TSS	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
11	chr19:53323800-53324600	Flanking Active TSS	Primary T helper memory cells from peripheral blood 2	blood
12	chr19:53323800-53324600	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Female	--
13	chr19:53323800-53324600	Flanking Active TSS	Monocytes-CD14+_RO01746	blood
14	chr19:53323800-53325000	Active TSS	H9 Cell Line	embryonic stem cell
15	chr19:53323800-53325000	Active TSS	Foreskin Melanocyte Primary Cells skin01	Skin
16	chr19:53323800-53325000	Active TSS	HepG2	liver
17	chr19:53323800-53325000	Active TSS	K562	blood
18	chr19:53323800-53325200	Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
19	chr19:53323800-53325200	Active TSS	Cortex derived primary cultured neurospheres	brain
20	chr19:53323800-53325200	Active TSS	Foreskin Keratinocyte Primary Cells skin02	Skin
21	chr19:53323800-53325200	Active TSS	Hela-S3	cervix
22	chr19:53323800-53325200	Active TSS	NHEK	skin
23	chr19:53323800-53325400	Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
24	chr19:53323800-53325400	Active TSS	Fetal Intestine Large	intestine
25	chr19:53323800-53325400	Active TSS	GM12878-XiMat	blood
26	chr19:53323800-53325600	Active TSS	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
27	chr19:53323800-53325600	Active TSS	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
28	chr19:53323800-53325600	Active TSS	Foreskin Fibroblast Primary Cells skin02	Skin
29	chr19:53324000-53324400	Flanking Active TSS	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
30	chr19:53324000-53324400	Flanking Active TSS	H9 Derived Neuron Cultured Cells	ES cell derived
31	chr19:53324000-53324400	Flanking Active TSS	Primary B cells from peripheral blood	blood
32	chr19:53324000-53324400	Flanking Active TSS	Primary T helper cells fromperipheralblood	blood
33	chr19:53324000-53324400	Flanking Active TSS	Primary Natural Killer cells fromperipheralblood	blood
34	chr19:53324000-53324400	Flanking Active TSS	Primary T killer memory cells from peripheral blood	blood
35	chr19:53324000-53324400	Flanking Active TSS	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
36	chr19:53324000-53324400	Flanking Active TSS	Foreskin Keratinocyte Primary Cells skin03	Skin
37	chr19:53324000-53324400	Flanking Active TSS	Foreskin Melanocyte Primary Cells skin03	Skin
38	chr19:53324000-53324400	Flanking Active TSS	Brain Hippocampus Middle	brain
39	chr19:53324000-53324400	Flanking Active TSS	Colonic Mucosa	Colon
40	chr19:53324000-53324400	Flanking Active TSS	Fetal Adrenal Gland	Adrenal Gland
41	chr19:53324000-53324400	Flanking Active TSS	Fetal Muscle Leg	muscle
42	chr19:53324000-53324400	Flanking Active TSS	Fetal Stomach	stomach
43	chr19:53324000-53324400	Flanking Active TSS	Thymus	Thymus
44	chr19:53324000-53324400	Flanking Active TSS	HUVEC	blood vessel
45	chr19:53324000-53324600	Bivalent/Poised TSS	iPS-18 Cell Line	embryonic stem cell
46	chr19:53324000-53324600	Flanking Active TSS	Primary B cells from cord blood	blood
47	chr19:53324000-53324600	Flanking Active TSS	Primary T cells fromperipheralblood	blood
48	chr19:53324000-53324600	Flanking Active TSS	Adipose Nuclei	Adipose
49	chr19:53324000-53324800	Flanking Active TSS	Primary mononuclear cells fromperipheralblood	Blood
50	chr19:53324000-53324800	Active TSS	Stomach Mucosa	stomach

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