Variant report

Variant rs57195161
Chromosome Location chr15:56144410-56144411
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:87 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:56115400-56148000 Weak transcription Ovary ovary
2 chr15:56116600-56150600 Weak transcription Right Ventricle heart
3 chr15:56116800-56162200 Weak transcription Fetal Heart heart
4 chr15:56118600-56151000 Weak transcription Fetal Kidney kidney
5 chr15:56118800-56147000 Weak transcription Gastric stomach
6 chr15:56118800-56149200 Weak transcription Brain Cingulate Gyrus brain
7 chr15:56118800-56151400 Weak transcription Brain Anterior Caudate brain
8 chr15:56120000-56144800 Strong transcription Skeletal Muscle Female skeletal muscle
9 chr15:56120000-56147800 Weak transcription HepG2 liver
10 chr15:56120600-56146600 Weak transcription Pancreas Pancrea
11 chr15:56120800-56147200 Weak transcription Thymus Thymus
12 chr15:56121200-56147200 Weak transcription Spleen Spleen
13 chr15:56122400-56145200 Weak transcription Rectal Mucosa Donor 31 rectum
14 chr15:56122600-56152000 Weak transcription Fetal Thymus thymus
15 chr15:56122600-56153800 Weak transcription Primary T cells fromperipheralblood blood
16 chr15:56122600-56154800 Weak transcription Primary monocytes fromperipheralblood blood
17 chr15:56122600-56156600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
18 chr15:56122800-56147200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
19 chr15:56122800-56147600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
20 chr15:56122800-56156000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
21 chr15:56127200-56155400 Strong transcription Osteobl bone
22 chr15:56127200-56155800 Strong transcription HSMM muscle
23 chr15:56129000-56157400 Weak transcription Sigmoid Colon Sigmoid Colon
24 chr15:56129600-56147400 Weak transcription Esophagus oesophagus
25 chr15:56129800-56146600 Weak transcription NHLF lung
26 chr15:56132000-56164800 Weak transcription Small Intestine intestine
27 chr15:56133000-56152600 Weak transcription Brain Hippocampus Middle brain
28 chr15:56133600-56154400 Weak transcription Monocytes-CD14+_RO01746 blood
29 chr15:56134200-56150600 Weak transcription Left Ventricle heart
30 chr15:56134400-56147400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
31 chr15:56134400-56150000 Weak transcription Psoas Muscle Psoas
32 chr15:56134400-56156600 Weak transcription Colon Smooth Muscle Colon
33 chr15:56134800-56151800 Weak transcription Cortex derived primary cultured neurospheres brain
34 chr15:56135000-56156600 Weak transcription Rectal Smooth Muscle rectum
35 chr15:56135200-56146000 Weak transcription Fetal Muscle Trunk muscle
36 chr15:56135200-56152600 Weak transcription Rectal Mucosa Donor 29 rectum
37 chr15:56135400-56147800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
38 chr15:56135600-56145400 Weak transcription HUVEC blood vessel
39 chr15:56136400-56145800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
40 chr15:56138200-56161800 Weak transcription K562 blood
41 chr15:56138400-56149000 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
42 chr15:56138600-56144600 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
43 chr15:56138600-56145000 Strong transcription Fetal Intestine Large intestine
44 chr15:56138600-56154400 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
45 chr15:56138800-56152800 Weak transcription GM12878-XiMat blood
46 chr15:56139400-56144800 Strong transcription Liver Liver
47 chr15:56139400-56155400 Strong transcription Primary neutrophils fromperipheralblood blood
48 chr15:56139600-56153200 Strong transcription NHEK skin
49 chr15:56139800-56144800 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
50 chr15:56139800-56144800 Strong transcription Placenta Placenta

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