Variant report

Variant rs573146640
Chromosome Location chr19:53357769-53357770
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:124 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:53339000-53357800 ZNF genes & repeats Primary hematopoietic stem cells short term culture blood
2 chr19:53339000-53359200 ZNF genes & repeats Monocytes-CD14+_RO01746 blood
3 chr19:53340800-53357800 ZNF genes & repeats Primary T regulatory cells fromperipheralblood blood
4 chr19:53342400-53357800 ZNF genes & repeats Liver Liver
5 chr19:53343200-53359200 ZNF genes & repeats Primary monocytes fromperipheralblood blood
6 chr19:53344000-53358000 ZNF genes & repeats Lung lung
7 chr19:53345400-53360200 Weak transcription Fetal Heart heart
8 chr19:53345400-53360200 Weak transcription Hela-S3 cervix
9 chr19:53345800-53360400 Weak transcription ES-WA7 Cell Line embryonic stem cell
10 chr19:53346200-53357800 Strong transcription HUES48 Cell Line embryonic stem cell
11 chr19:53346200-53357800 Strong transcription Fetal Stomach stomach
12 chr19:53346400-53357800 Strong transcription Fetal Muscle Leg muscle
13 chr19:53346400-53360400 Weak transcription Fetal Brain Male brain
14 chr19:53347600-53360000 Weak transcription HMEC breast
15 chr19:53348000-53359200 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
16 chr19:53348000-53359200 Strong transcription HUES6 Cell Line embryonic stem cell
17 chr19:53348000-53360200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
18 chr19:53348200-53358200 Strong transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
19 chr19:53348600-53358800 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
20 chr19:53348600-53360200 Weak transcription Stomach Mucosa stomach
21 chr19:53349200-53360200 Weak transcription Pancreatic Islets Pancreatic Islet
22 chr19:53349800-53360000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
23 chr19:53349800-53360000 Weak transcription iPS-15b Cell Line embryonic stem cell
24 chr19:53350000-53357800 Strong transcription Breast Myoepithelial Primary Cells Breast
25 chr19:53350200-53359200 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
26 chr19:53350800-53358000 Strong transcription Primary Natural Killer cells fromperipheralblood blood
27 chr19:53351000-53357800 ZNF genes & repeats Fetal Intestine Small intestine
28 chr19:53351200-53358400 Strong transcription Dnd41 blood
29 chr19:53351600-53357800 Strong transcription Duodenum Smooth Muscle Duodenum
30 chr19:53351600-53358000 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
31 chr19:53351600-53360200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
32 chr19:53351800-53357800 Strong transcription Rectal Mucosa Donor 29 rectum
33 chr19:53352000-53357800 Strong transcription Primary T cells fromperipheralblood blood
34 chr19:53352000-53359200 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
35 chr19:53352000-53360200 Weak transcription Brain Substantia Nigra brain
36 chr19:53352200-53360000 Weak transcription ES-I3 Cell Line embryonic stem cell
37 chr19:53352400-53360000 Weak transcription HUVEC blood vessel
38 chr19:53352600-53360000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
39 chr19:53352800-53360000 Weak transcription NHDF-Ad bronchial
40 chr19:53353000-53357800 Strong transcription Primary T cells from cord blood blood
41 chr19:53353000-53360000 Weak transcription Brain Cingulate Gyrus brain
42 chr19:53353200-53357800 Strong transcription Primary T helper naive cells fromperipheralblood blood
43 chr19:53353600-53357800 Strong transcription Rectal Mucosa Donor 31 rectum
44 chr19:53353600-53360200 Weak transcription Colon Smooth Muscle Colon
45 chr19:53353800-53357800 Strong transcription Primary T cells effector/memory enriched fromperipheralblood blood
46 chr19:53353800-53360000 Weak transcription Brain Germinal Matrix brain
47 chr19:53353800-53360000 Weak transcription Fetal Lung lung
48 chr19:53354200-53357800 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
49 chr19:53354800-53360000 Weak transcription Brain Hippocampus Middle brain
50 chr19:53355000-53357800 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --

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