Variant report

Variant rs57513077
Chromosome Location chr1:149974127-149974128
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:107 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:149948200-149977400 Weak transcription Fetal Muscle Trunk muscle
2 chr1:149948200-149981000 Weak transcription Primary T cells fromperipheralblood blood
3 chr1:149948400-149981400 Weak transcription Esophagus oesophagus
4 chr1:149949400-149975400 Weak transcription Placenta Placenta
5 chr1:149949600-149974400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
6 chr1:149952200-149980800 Weak transcription Primary T regulatory cells fromperipheralblood blood
7 chr1:149953000-149978800 Weak transcription Pancreas Pancrea
8 chr1:149957800-149978600 Weak transcription Spleen Spleen
9 chr1:149959400-149975800 Weak transcription Fetal Kidney kidney
10 chr1:149959600-149975400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
11 chr1:149960000-149975400 Weak transcription Hela-S3 cervix
12 chr1:149965000-149978400 Genic enhancers Foreskin Melanocyte Primary Cells skin03 Skin
13 chr1:149965000-149981400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
14 chr1:149965200-149976000 Weak transcription Lung lung
15 chr1:149965400-149975600 Weak transcription Sigmoid Colon Sigmoid Colon
16 chr1:149966200-149974400 Weak transcription Brain Germinal Matrix brain
17 chr1:149967400-149978600 Weak transcription Gastric stomach
18 chr1:149967800-149981200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
19 chr1:149968200-149980800 Weak transcription H9 Cell Line embryonic stem cell
20 chr1:149968400-149980800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
21 chr1:149968600-149980000 Weak transcription iPS-18 Cell Line embryonic stem cell
22 chr1:149969000-149975600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
23 chr1:149969000-149977000 Weak transcription iPS-20b Cell Line embryonic stem cell
24 chr1:149969000-149980800 Weak transcription Placenta Amnion Placenta Amnion
25 chr1:149969600-149974400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
26 chr1:149969600-149978600 Weak transcription HepG2 liver
27 chr1:149969600-149978800 Weak transcription HMEC breast
28 chr1:149969800-149976800 Weak transcription NHEK skin
29 chr1:149969800-149979000 Weak transcription iPS-15b Cell Line embryonic stem cell
30 chr1:149969800-149979800 Weak transcription Pancreatic Islets Pancreatic Islet
31 chr1:149969800-149981400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
32 chr1:149970000-149974400 Weak transcription Fetal Lung lung
33 chr1:149970000-149975200 Weak transcription HUES48 Cell Line embryonic stem cell
34 chr1:149970000-149975400 Weak transcription Psoas Muscle Psoas
35 chr1:149970000-149977200 Weak transcription Rectal Mucosa Donor 29 rectum
36 chr1:149970000-149978600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
37 chr1:149970000-149978800 Weak transcription Small Intestine intestine
38 chr1:149970000-149980400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
39 chr1:149970000-149981000 Weak transcription Primary T helper naive cells from peripheral blood blood
40 chr1:149970000-149981000 Weak transcription Primary T helper naive cells fromperipheralblood blood
41 chr1:149970000-149981000 Weak transcription Primary T helper cells fromperipheralblood blood
42 chr1:149970200-149974400 Weak transcription ES-I3 Cell Line embryonic stem cell
43 chr1:149970200-149974400 Weak transcription Liver Liver
44 chr1:149970200-149980000 Weak transcription Primary T killer memory cells from peripheral blood blood
45 chr1:149970200-149980600 Weak transcription H1 Cell Line embryonic stem cell
46 chr1:149970400-149978600 Weak transcription Primary T helper cells PMA-I stimulated --
47 chr1:149970400-149979800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
48 chr1:149970600-149974400 Weak transcription Duodenum Mucosa Duodenum
49 chr1:149970600-149980000 Weak transcription Primary T killer naive cells fromperipheralblood blood
50 chr1:149971600-149978200 Strong transcription Fetal Intestine Large intestine

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