The 2.0 version of rSNPBase

Variant report

Variant rs57517571
Chromosome Location chr8:66716239-66716240
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:64 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr8:66701600-66717000 Weak transcription Gastric stomach
2 chr8:66707800-66720200 Weak transcription Aorta Aorta
3 chr8:66711000-66721600 Enhancers Primary T killer naive cells fromperipheralblood blood
4 chr8:66711000-66722400 Enhancers Primary T helper memory cells from peripheral blood 2 blood
5 chr8:66711800-66717400 Weak transcription Skeletal Muscle Male skeletal muscle
6 chr8:66711800-66717400 Weak transcription Dnd41 blood
7 chr8:66712600-66718000 Weak transcription Stomach Mucosa stomach
8 chr8:66712800-66717000 Weak transcription Left Ventricle heart
9 chr8:66713000-66717000 Weak transcription Right Ventricle heart
10 chr8:66713000-66717200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
11 chr8:66713000-66717800 Weak transcription Duodenum Smooth Muscle Duodenum
12 chr8:66713000-66717800 Weak transcription Fetal Heart heart
13 chr8:66713000-66717800 Weak transcription Skeletal Muscle Female skeletal muscle
14 chr8:66713000-66718800 Weak transcription Brain Inferior Temporal Lobe brain
15 chr8:66713200-66717200 Weak transcription K562 blood
16 chr8:66713200-66717800 Weak transcription Colon Smooth Muscle Colon
17 chr8:66713200-66718800 Weak transcription Psoas Muscle Psoas
18 chr8:66713200-66719000 Enhancers Primary T helper memory cells from peripheral blood 1 blood
19 chr8:66713200-66720000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
20 chr8:66713400-66717400 Weak transcription HMEC breast
21 chr8:66713400-66718800 Weak transcription Sigmoid Colon Sigmoid Colon
22 chr8:66713400-66720200 Weak transcription Right Atrium heart
23 chr8:66713400-66738200 Weak transcription H9 Cell Line embryonic stem cell
24 chr8:66713600-66717200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
25 chr8:66713600-66717200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
26 chr8:66713600-66718800 Weak transcription Brain Hippocampus Middle brain
27 chr8:66713800-66718800 Weak transcription Small Intestine intestine
28 chr8:66713800-66721000 Enhancers Primary T killer memory cells from peripheral blood blood
29 chr8:66714000-66719800 Weak transcription Brain Angular Gyrus brain
30 chr8:66714200-66723400 Weak transcription Brain Germinal Matrix brain
31 chr8:66714600-66719400 Weak transcription HUES48 Cell Line embryonic stem cell
32 chr8:66714800-66734400 Weak transcription iPS-18 Cell Line embryonic stem cell
33 chr8:66715000-66716400 ZNF genes & repeats hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
34 chr8:66715000-66716600 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
35 chr8:66715000-66717000 Strong transcription Fetal Thymus thymus
36 chr8:66715000-66720000 Enhancers Primary T helper naive cells fromperipheralblood blood
37 chr8:66715000-66720400 ZNF genes & repeats GM12878-XiMat blood
38 chr8:66715200-66716400 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
39 chr8:66715200-66716400 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
40 chr8:66715200-66718600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
41 chr8:66715200-66720000 Weak transcription Thymus Thymus
42 chr8:66715400-66716600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
43 chr8:66715400-66716800 Weak transcription Primary T cells fromperipheralblood blood
44 chr8:66715400-66716800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
45 chr8:66715400-66717000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
46 chr8:66715400-66723400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
47 chr8:66715600-66717800 Enhancers Primary T helper cells PMA-I stimulated --
48 chr8:66715800-66716600 Strong transcription Primary hematopoietic stem cells short term culture blood
49 chr8:66715800-66718000 Strong transcription Primary hematopoietic stem cells blood
50 chr8:66716000-66716400 Strong transcription H1 Cell Line embryonic stem cell

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Last update: Aug 31, 2015