Variant report

Variant	rs2357474
Chromosome Location	chr8:66669407-66669408
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 36 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:36)

rs_ID	r²[population]
rs11774586	0.94[CEU][hapmap]
rs11776756	0.94[CEU][hapmap]
rs11779350	0.88[CEU][hapmap]
rs11783534	0.94[CEU][hapmap];0.81[EUR][1000 genomes]
rs11784267	0.94[CEU][hapmap];0.80[EUR][1000 genomes]
rs11987993	0.94[CEU][hapmap];0.81[EUR][1000 genomes]
rs11993375	0.81[ASN][1000 genomes]
rs11995215	0.87[ASN][1000 genomes]
rs12114361	0.87[ASN][1000 genomes]
rs1355830	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs17396080	1.00[CHB][hapmap];0.85[JPT][hapmap];0.95[ASN][1000 genomes]
rs55738339	0.80[EUR][1000 genomes]
rs56295337	0.80[EUR][1000 genomes]
rs56784317	0.87[ASN][1000 genomes]
rs57261641	0.83[ASN][1000 genomes]
rs57517571	0.91[ASN][1000 genomes]
rs57688867	0.87[ASN][1000 genomes]
rs58213885	0.91[ASN][1000 genomes]
rs58760509	0.91[ASN][1000 genomes]
rs59322796	0.91[ASN][1000 genomes]
rs60213300	0.91[ASN][1000 genomes]
rs61464990	0.91[ASN][1000 genomes]
rs61575731	0.87[ASN][1000 genomes]
rs61736485	0.91[ASN][1000 genomes]
rs6982469	0.94[CEU][hapmap];0.80[EUR][1000 genomes]
rs6984768	0.87[ASN][1000 genomes]
rs6987499	0.87[ASN][1000 genomes]
rs6992865	0.81[EUR][1000 genomes]
rs7005571	1.00[JPT][hapmap];0.87[ASN][1000 genomes]
rs7014758	0.85[JPT][hapmap]
rs71529177	0.82[ASN][1000 genomes]
rs73693418	0.91[ASN][1000 genomes]
rs73693420	0.91[ASN][1000 genomes]
rs7821744	1.00[JPT][hapmap];0.87[ASN][1000 genomes]
rs7836663	0.87[ASN][1000 genomes]
rs7845030	0.87[AFR][1000 genomes];0.98[AMR][1000 genomes];0.96[EUR][1000 genomes];0.95[ASN][1000 genomes]

No data

Chromatin state (count:102 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:66621400-66673000	Weak transcription	Colon Smooth Muscle	Colon
2	chr8:66635200-66674000	Weak transcription	iPS-15b Cell Line	embryonic stem cell
3	chr8:66635400-66673600	Weak transcription	Brain Substantia Nigra	brain
4	chr8:66635400-66673800	Weak transcription	Brain Cingulate Gyrus	brain
5	chr8:66635400-66674000	Weak transcription	Fetal Brain Male	brain
6	chr8:66645600-66686000	Weak transcription	HSMM	muscle
7	chr8:66646800-66670200	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
8	chr8:66647600-66670800	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
9	chr8:66647600-66673400	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
10	chr8:66647800-66695200	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
11	chr8:66649000-66690200	Weak transcription	H9 Cell Line	embryonic stem cell
12	chr8:66649600-66683800	Weak transcription	ES-I3 Cell Line	embryonic stem cell
13	chr8:66650000-66671400	Weak transcription	Right Ventricle	heart
14	chr8:66651000-66671600	Weak transcription	Cortex derived primary cultured neurospheres	brain
15	chr8:66651000-66673600	Weak transcription	Brain Hippocampus Middle	brain
16	chr8:66651000-66676600	Weak transcription	Fetal Lung	lung
17	chr8:66651200-66673600	Weak transcription	Placenta	Placenta
18	chr8:66651400-66673800	Weak transcription	NHLF	lung
19	chr8:66651600-66671000	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
20	chr8:66651600-66671000	Weak transcription	Fetal Stomach	stomach
21	chr8:66651600-66671200	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
22	chr8:66651600-66672800	Weak transcription	Hela-S3	cervix
23	chr8:66651600-66673000	Weak transcription	Duodenum Smooth Muscle	Duodenum
24	chr8:66651600-66679400	Weak transcription	Rectal Mucosa Donor 29	rectum
25	chr8:66651600-66690200	Weak transcription	NH-A	brain
26	chr8:66651800-66673800	Weak transcription	A549	lung
27	chr8:66654600-66690200	Weak transcription	Lung	lung
28	chr8:66655800-66671600	Weak transcription	Esophagus	oesophagus
29	chr8:66655800-66674000	Weak transcription	Aorta	Aorta
30	chr8:66656400-66687800	Weak transcription	Pancreas	Pancrea
31	chr8:66657000-66671000	Weak transcription	Right Atrium	heart
32	chr8:66657000-66685000	Weak transcription	Fetal Intestine Large	intestine
33	chr8:66657600-66670400	Weak transcription	Fetal Muscle Leg	muscle
34	chr8:66658600-66686000	Weak transcription	Fetal Muscle Trunk	muscle
35	chr8:66658600-66687800	Weak transcription	H1 Cell Line	embryonic stem cell
36	chr8:66659800-66670600	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
37	chr8:66659800-66673000	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
38	chr8:66659800-66674400	Weak transcription	NHEK	skin
39	chr8:66659800-66687400	Weak transcription	Primary neutrophils fromperipheralblood	blood
40	chr8:66660000-66670400	Weak transcription	iPS-18 Cell Line	embryonic stem cell
41	chr8:66660000-66670800	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
42	chr8:66660000-66673800	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
43	chr8:66660000-66673800	Weak transcription	HMEC	breast
44	chr8:66660000-66679400	Weak transcription	HUES6 Cell Line	embryonic stem cell
45	chr8:66660200-66671000	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
46	chr8:66660400-66671400	Weak transcription	iPS-20b Cell Line	embryonic stem cell
47	chr8:66660400-66681600	Weak transcription	HUES48 Cell Line	embryonic stem cell
48	chr8:66661400-66670800	Weak transcription	Gastric	stomach
49	chr8:66662800-66690200	Weak transcription	HepG2	liver
50	chr8:66664600-66674000	Weak transcription	Osteobl	bone

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