Variant report

Variant	rs1355830
Chromosome Location	chr8:66666258-66666259
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr8:66665862..66667938-chr8:66670976..66673867,2	MCF-7	breast:
2	chr8:66659420..66661277-chr8:66665077..66666654,2	K562	blood:

rs_ID	r²[population]
rs11774586	0.80[EUR][1000 genomes]
rs11776756	0.81[EUR][1000 genomes]
rs11783534	0.83[EUR][1000 genomes]
rs11784267	0.82[EUR][1000 genomes]
rs11987993	0.83[EUR][1000 genomes]
rs11995215	0.82[ASN][1000 genomes]
rs12114361	0.82[ASN][1000 genomes]
rs17396080	0.91[ASN][1000 genomes]
rs2357474	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs35677611	0.80[EUR][1000 genomes]
rs55738339	0.82[EUR][1000 genomes]
rs56295337	0.82[EUR][1000 genomes]
rs56784317	0.82[ASN][1000 genomes]
rs57517571	0.86[ASN][1000 genomes]
rs57688867	0.82[ASN][1000 genomes]
rs58213885	0.86[ASN][1000 genomes]
rs58760509	0.86[ASN][1000 genomes]
rs59322796	0.86[ASN][1000 genomes]
rs60213300	0.86[ASN][1000 genomes]
rs61464990	0.86[ASN][1000 genomes]
rs61575731	0.82[ASN][1000 genomes]
rs61736485	0.86[ASN][1000 genomes]
rs6982469	0.82[EUR][1000 genomes]
rs6984768	0.82[ASN][1000 genomes]
rs6987499	0.82[ASN][1000 genomes]
rs6992865	0.83[EUR][1000 genomes]
rs7005571	0.82[ASN][1000 genomes]
rs71529177	0.86[ASN][1000 genomes]
rs73693418	0.86[ASN][1000 genomes]
rs73693420	0.86[ASN][1000 genomes]
rs7821744	0.82[ASN][1000 genomes]
rs7836663	0.82[ASN][1000 genomes]
rs7845030	0.98[AFR][1000 genomes];0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];0.91[ASN][1000 genomes]

Chromatin state (count:98 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:66621400-66673000	Weak transcription	Colon Smooth Muscle	Colon
2	chr8:66628400-66666600	Strong transcription	Dnd41	blood
3	chr8:66635200-66674000	Weak transcription	iPS-15b Cell Line	embryonic stem cell
4	chr8:66635400-66673600	Weak transcription	Brain Substantia Nigra	brain
5	chr8:66635400-66673800	Weak transcription	Brain Cingulate Gyrus	brain
6	chr8:66635400-66674000	Weak transcription	Fetal Brain Male	brain
7	chr8:66645600-66686000	Weak transcription	HSMM	muscle
8	chr8:66646800-66670200	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
9	chr8:66647600-66670800	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
10	chr8:66647600-66673400	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
11	chr8:66647800-66695200	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
12	chr8:66648000-66668000	Weak transcription	Liver	Liver
13	chr8:66648600-66668000	Weak transcription	Fetal Brain Female	brain
14	chr8:66649000-66668000	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
15	chr8:66649000-66690200	Weak transcription	H9 Cell Line	embryonic stem cell
16	chr8:66649600-66683800	Weak transcription	ES-I3 Cell Line	embryonic stem cell
17	chr8:66650000-66671400	Weak transcription	Right Ventricle	heart
18	chr8:66651000-66671600	Weak transcription	Cortex derived primary cultured neurospheres	brain
19	chr8:66651000-66673600	Weak transcription	Brain Hippocampus Middle	brain
20	chr8:66651000-66676600	Weak transcription	Fetal Lung	lung
21	chr8:66651200-66673600	Weak transcription	Placenta	Placenta
22	chr8:66651400-66673800	Weak transcription	NHLF	lung
23	chr8:66651600-66671000	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
24	chr8:66651600-66671000	Weak transcription	Fetal Stomach	stomach
25	chr8:66651600-66671200	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
26	chr8:66651600-66672800	Weak transcription	Hela-S3	cervix
27	chr8:66651600-66673000	Weak transcription	Duodenum Smooth Muscle	Duodenum
28	chr8:66651600-66679400	Weak transcription	Rectal Mucosa Donor 29	rectum
29	chr8:66651600-66690200	Weak transcription	NH-A	brain
30	chr8:66651800-66668000	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
31	chr8:66651800-66668000	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
32	chr8:66651800-66673800	Weak transcription	A549	lung
33	chr8:66654600-66690200	Weak transcription	Lung	lung
34	chr8:66654800-66668000	Weak transcription	Psoas Muscle	Psoas
35	chr8:66655800-66671600	Weak transcription	Esophagus	oesophagus
36	chr8:66655800-66674000	Weak transcription	Aorta	Aorta
37	chr8:66656400-66687800	Weak transcription	Pancreas	Pancrea
38	chr8:66657000-66671000	Weak transcription	Right Atrium	heart
39	chr8:66657000-66685000	Weak transcription	Fetal Intestine Large	intestine
40	chr8:66657200-66666800	Strong transcription	Primary B cells from cord blood	blood
41	chr8:66657600-66670400	Weak transcription	Fetal Muscle Leg	muscle
42	chr8:66658400-66669200	Weak transcription	Duodenum Mucosa	Duodenum
43	chr8:66658600-66669200	Weak transcription	Thymus	Thymus
44	chr8:66658600-66686000	Weak transcription	Fetal Muscle Trunk	muscle
45	chr8:66658600-66687800	Weak transcription	H1 Cell Line	embryonic stem cell
46	chr8:66659400-66666600	Genic enhancers	Primary T helper naive cells fromperipheralblood	blood
47	chr8:66659800-66667800	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
48	chr8:66659800-66670600	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
49	chr8:66659800-66673000	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
50	chr8:66659800-66674400	Weak transcription	NHEK	skin

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