The 2.0 version of rSNPBase

Variant report

Variant rs6984768
Chromosome Location chr8:66739147-66739148
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:80 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr8:66719400-66750000 Weak transcription Hela-S3 cervix
2 chr8:66720400-66744800 Weak transcription NHEK skin
3 chr8:66725200-66742000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
4 chr8:66725200-66747000 Weak transcription NHDF-Ad bronchial
5 chr8:66725400-66742000 Weak transcription HMEC breast
6 chr8:66725400-66751200 Weak transcription Fetal Heart heart
7 chr8:66729000-66744800 Weak transcription Gastric stomach
8 chr8:66729400-66744800 Weak transcription Spleen Spleen
9 chr8:66729400-66749400 Weak transcription Fetal Brain Male brain
10 chr8:66730000-66741400 Weak transcription Duodenum Mucosa Duodenum
11 chr8:66730000-66741600 Weak transcription Primary neutrophils fromperipheralblood blood
12 chr8:66731000-66752600 Weak transcription Stomach Smooth Muscle stomach
13 chr8:66731400-66741000 Weak transcription Fetal Muscle Trunk muscle
14 chr8:66731600-66740000 Weak transcription A549 lung
15 chr8:66731600-66741400 Weak transcription Fetal Stomach stomach
16 chr8:66731600-66752600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
17 chr8:66731800-66752600 Weak transcription Adipose Nuclei Adipose
18 chr8:66732200-66741400 Weak transcription Fetal Intestine Large intestine
19 chr8:66732400-66739200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
20 chr8:66732400-66745000 Weak transcription Duodenum Smooth Muscle Duodenum
21 chr8:66732400-66745000 Weak transcription Rectal Mucosa Donor 29 rectum
22 chr8:66732600-66751000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
23 chr8:66732600-66751000 Weak transcription Fetal Lung lung
24 chr8:66733000-66752000 Weak transcription Fetal Intestine Small intestine
25 chr8:66733400-66743800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
26 chr8:66734200-66742800 Enhancers Primary T killer memory cells from peripheral blood blood
27 chr8:66734400-66740200 Genic enhancers Primary T helper memory cells from peripheral blood 1 blood
28 chr8:66734800-66740600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
29 chr8:66734800-66742000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
30 chr8:66734800-66749000 Weak transcription Small Intestine intestine
31 chr8:66734800-66752600 Weak transcription Left Ventricle heart
32 chr8:66735000-66746000 Weak transcription Sigmoid Colon Sigmoid Colon
33 chr8:66735000-66746600 Weak transcription Brain Cingulate Gyrus brain
34 chr8:66735200-66741800 Weak transcription Primary monocytes fromperipheralblood blood
35 chr8:66736000-66740200 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
36 chr8:66736200-66741800 Genic enhancers Primary T helper cells PMA-I stimulated --
37 chr8:66736400-66739600 Strong transcription Fetal Thymus thymus
38 chr8:66736600-66741000 ZNF genes & repeats GM12878-XiMat blood
39 chr8:66737000-66742000 Enhancers Primary T helper memory cells from peripheral blood 2 blood
40 chr8:66737400-66739200 Enhancers HUES64 Cell Line embryonic stem cell
41 chr8:66737600-66739400 Enhancers iPS-15b Cell Line embryonic stem cell
42 chr8:66737600-66740000 Strong transcription Primary B cells from cord blood blood
43 chr8:66737800-66739200 Genic enhancers Primary T cells fromperipheralblood blood
44 chr8:66737800-66740000 Enhancers ES-UCSF4 Cell Line embryonic stem cell
45 chr8:66738000-66739200 Genic enhancers Primary T helper 17 cells PMA-I stimulated --
46 chr8:66738000-66739400 Enhancers H1 Cell Line embryonic stem cell
47 chr8:66738000-66740200 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
48 chr8:66738000-66741200 Strong transcription Dnd41 blood
49 chr8:66738200-66739200 Enhancers H9 Cell Line embryonic stem cell
50 chr8:66738200-66739200 Transcr. at gene 5' and 3' Primary T cells from cord blood blood

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Last update: Aug 31, 2015