Variant report

Variant	rs58132610
Chromosome Location	chr9:102023427-102023428
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr9:102021323..102023427-chr9:102025498..102028226,2	K562	blood:
2	chr9:102016447..102018282-chr9:102021293..102023502,2	K562	blood:
3	chr9:101983281..101986775-chr9:102018157..102023466,4	MCF-7	breast:
4	chr9:101934883..101936610-chr9:102021893..102023523,2	K562	blood:

Variant related genes	Relation type
ENSG00000106803	Chromatin interaction
ENSG00000119523	Chromatin interaction

Extended variants
information (count: 27 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:27)

rs_ID	r²[population]
rs151169	0.93[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs162616	0.92[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs162623	0.95[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs162629	0.93[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs162630	0.93[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs1648641	0.93[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs1746155	0.86[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs189042	0.93[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs193021	0.93[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs2114429	0.85[ASN][1000 genomes]
rs2900576	0.81[AMR][1000 genomes];0.91[ASN][1000 genomes]
rs383602	0.92[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs418919	0.92[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs433706	0.85[ASN][1000 genomes]
rs449188	0.92[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs4742765	0.94[ASN][1000 genomes]
rs4743336	0.91[ASN][1000 genomes]
rs526102	0.92[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs56408008	0.85[ASN][1000 genomes]
rs57418404	0.81[AMR][1000 genomes];0.89[ASN][1000 genomes]
rs58111537	0.85[ASN][1000 genomes]
rs692905	0.85[ASN][1000 genomes]
rs701371	0.93[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs7025649	0.94[ASN][1000 genomes]
rs7031176	0.85[ASN][1000 genomes]
rs7031193	1.00[AFR][1000 genomes];0.82[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs7048711	0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];0.85[ASN][1000 genomes]

No data

Chromatin state (count:21 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:102022200-102028200	Weak transcription	Spleen	Spleen
2	chr9:102022200-102028800	Weak transcription	Psoas Muscle	Psoas
3	chr9:102022200-102028800	Weak transcription	Monocytes-CD14+_RO01746	blood
4	chr9:102022200-102034800	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
5	chr9:102022200-102038000	Weak transcription	Aorta	Aorta
6	chr9:102022400-102023600	Enhancers	Fetal Heart	heart
7	chr9:102022400-102024400	Enhancers	Fetal Thymus	thymus
8	chr9:102022400-102025200	Weak transcription	Primary B cells from peripheral blood	blood
9	chr9:102022400-102028600	Weak transcription	Primary monocytes fromperipheralblood	blood
10	chr9:102022400-102028800	Weak transcription	Adipose Nuclei	Adipose
11	chr9:102022600-102023600	Enhancers	Brain Anterior Caudate	brain
12	chr9:102022600-102024200	Weak transcription	GM12878-XiMat	blood
13	chr9:102022600-102028800	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
14	chr9:102022800-102024200	Weak transcription	Skeletal Muscle Female	skeletal muscle
15	chr9:102022800-102028400	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
16	chr9:102022800-102028600	Weak transcription	Brain Cingulate Gyrus	brain
17	chr9:102022800-102028600	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
18	chr9:102022800-102028800	Weak transcription	Primary T cells from cord blood	blood
19	chr9:102022800-102028800	Weak transcription	Brain Inferior Temporal Lobe	brain
20	chr9:102023000-102028400	Weak transcription	Skeletal Muscle Male	skeletal muscle
21	chr9:102023400-102023800	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell

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