Variant report

Variant	rs57418404
Chromosome Location	chr9:102041072-102041073
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr9:102035628..102037347-chr9:102039745..102042261,2	K562	blood:

Extended variants
information (count: 29 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:28)

rs_ID	r²[population]
rs151169	0.98[ASN][1000 genomes]
rs162616	1.00[ASN][1000 genomes]
rs162623	0.92[ASN][1000 genomes]
rs162629	0.98[ASN][1000 genomes]
rs162630	0.87[ASN][1000 genomes]
rs1648641	0.94[ASN][1000 genomes]
rs1746155	0.92[ASN][1000 genomes]
rs184437	0.95[AMR][1000 genomes];0.90[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs189042	1.00[ASN][1000 genomes]
rs193021	0.98[ASN][1000 genomes]
rs2114429	0.92[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs2900576	1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs383602	0.96[ASN][1000 genomes]
rs418919	0.98[ASN][1000 genomes]
rs433706	0.93[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs449188	0.96[ASN][1000 genomes]
rs4742765	0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs4743336	0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs526102	0.96[ASN][1000 genomes]
rs56408008	0.90[AFR][1000 genomes];0.95[AMR][1000 genomes];0.95[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs58111537	0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs58132610	0.81[AMR][1000 genomes];0.89[ASN][1000 genomes]
rs692905	0.92[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs701371	0.96[ASN][1000 genomes]
rs7025649	0.95[AMR][1000 genomes];0.96[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs7031176	0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7031193	0.98[AMR][1000 genomes];0.96[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs7048711	0.97[AFR][1000 genomes];0.96[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv893620	chr9:102029791-102194921	Enhancers Flanking Bivalent TSS/Enh Weak transcription Active TSS Bivalent/Poised TSS Flanking Active TSS Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:102039800-102041200	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin

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