Variant report

Variant	rs58163515
Chromosome Location	chr10:91397564-91397565
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr10:91395971..91398533-chr10:91405647..91407667,2	K562	blood:

Extended variants
information (count: 54 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:54)

rs_ID	r²[population]
rs1129777	0.89[AMR][1000 genomes];0.91[ASN][1000 genomes]
rs11330	0.92[AMR][1000 genomes];0.96[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs12570750	0.86[AMR][1000 genomes];0.86[ASN][1000 genomes]
rs12570813	0.87[AMR][1000 genomes];0.91[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs12571268	0.89[AMR][1000 genomes];0.91[ASN][1000 genomes]
rs12571918	0.92[AMR][1000 genomes];0.81[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs12572012	0.89[AMR][1000 genomes];0.91[ASN][1000 genomes]
rs12572608	0.92[AMR][1000 genomes];0.84[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs12572869	0.92[AMR][1000 genomes];0.84[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs12572928	0.86[AMR][1000 genomes];0.82[ASN][1000 genomes]
rs12763346	0.84[AMR][1000 genomes];0.91[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs12764076	0.87[AMR][1000 genomes];0.90[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs12771413	0.92[AMR][1000 genomes];0.96[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs12775091	0.86[AMR][1000 genomes];0.86[ASN][1000 genomes]
rs12775783	0.92[AMR][1000 genomes];0.84[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs12783582	0.89[AMR][1000 genomes];0.91[ASN][1000 genomes]
rs12783845	0.89[AMR][1000 genomes];0.91[ASN][1000 genomes]
rs1409357	0.92[AMR][1000 genomes];0.81[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs1590566	0.83[ASN][1000 genomes]
rs17125834	0.92[AMR][1000 genomes];0.81[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs17126269	0.89[AMR][1000 genomes];0.91[ASN][1000 genomes]
rs17127001	0.86[AMR][1000 genomes];0.86[ASN][1000 genomes]
rs17127596	0.81[AMR][1000 genomes]
rs1926139	0.86[AMR][1000 genomes];0.86[ASN][1000 genomes]
rs1969902	0.84[ASN][1000 genomes]
rs2094214	0.89[AMR][1000 genomes];0.83[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs2418929	0.89[AMR][1000 genomes];0.88[ASN][1000 genomes]
rs34379399	0.89[AMR][1000 genomes];0.93[ASN][1000 genomes]
rs34408087	0.86[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs34486602	0.81[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs34591435	0.89[AMR][1000 genomes];0.91[ASN][1000 genomes]
rs34663515	0.92[AMR][1000 genomes];0.96[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs34692063	0.89[AMR][1000 genomes];0.91[ASN][1000 genomes]
rs34784021	0.82[ASN][1000 genomes]
rs34928397	0.82[AMR][1000 genomes];0.86[ASN][1000 genomes]
rs34993776	0.85[AMR][1000 genomes];0.93[ASN][1000 genomes]
rs36019294	0.86[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs3740034	0.85[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs3740035	0.89[AMR][1000 genomes];0.91[ASN][1000 genomes]
rs3758388	0.89[AMR][1000 genomes];0.91[ASN][1000 genomes]
rs3824607	0.89[AMR][1000 genomes];0.91[ASN][1000 genomes]
rs3925446	0.89[AMR][1000 genomes];0.87[ASN][1000 genomes]
rs3962370	0.84[ASN][1000 genomes]
rs4934494	0.92[ASN][1000 genomes]
rs55823491	0.86[AMR][1000 genomes];0.86[ASN][1000 genomes]
rs56189305	0.88[ASN][1000 genomes]
rs6586213	0.81[AMR][1000 genomes];0.91[ASN][1000 genomes]
rs67111731	0.92[AMR][1000 genomes];0.83[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs67827533	0.86[AMR][1000 genomes];0.88[ASN][1000 genomes]
rs7081788	0.81[AMR][1000 genomes];0.93[ASN][1000 genomes]
rs7098233	0.81[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs72818784	0.82[ASN][1000 genomes]
rs745215	0.93[ASN][1000 genomes]
rs768805	0.89[AMR][1000 genomes];0.91[ASN][1000 genomes]

No data

Chromatin state (count:85 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:91351600-91403400	Weak transcription	Esophagus	oesophagus
2	chr10:91352600-91403400	Weak transcription	Small Intestine	intestine
3	chr10:91353800-91403800	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
4	chr10:91359800-91403200	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
5	chr10:91370200-91403200	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
6	chr10:91371800-91401600	Weak transcription	Rectal Mucosa Donor 31	rectum
7	chr10:91371800-91403200	Weak transcription	HSMMtube	muscle
8	chr10:91380600-91403200	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
9	chr10:91383800-91402600	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
10	chr10:91385000-91403000	Weak transcription	Fetal Muscle Trunk	muscle
11	chr10:91385400-91403000	Weak transcription	Primary hematopoietic stem cells	blood
12	chr10:91385600-91402800	Weak transcription	Fetal Muscle Leg	muscle
13	chr10:91385800-91403200	Weak transcription	Fetal Brain Male	brain
14	chr10:91386000-91402800	Weak transcription	NH-A	brain
15	chr10:91386000-91403000	Weak transcription	NHDF-Ad	bronchial
16	chr10:91386000-91403200	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
17	chr10:91386000-91403200	Weak transcription	Brain Inferior Temporal Lobe	brain
18	chr10:91386000-91403200	Weak transcription	Ovary	ovary
19	chr10:91386800-91403200	Weak transcription	Duodenum Smooth Muscle	Duodenum
20	chr10:91388200-91403400	Weak transcription	Thymus	Thymus
21	chr10:91389600-91402800	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
22	chr10:91390600-91399200	Strong transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
23	chr10:91391000-91398000	Weak transcription	K562	blood
24	chr10:91391400-91401600	Weak transcription	Fetal Lung	lung
25	chr10:91391800-91399600	Strong transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
26	chr10:91392200-91401200	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
27	chr10:91392200-91402200	Weak transcription	iPS-15b Cell Line	embryonic stem cell
28	chr10:91392600-91403000	Weak transcription	Rectal Mucosa Donor 29	rectum
29	chr10:91392600-91403200	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
30	chr10:91392600-91403200	Weak transcription	Stomach Smooth Muscle	stomach
31	chr10:91392800-91398800	Strong transcription	ES-UCSF4 Cell Line	embryonic stem cell
32	chr10:91392800-91402800	Weak transcription	Primary B cells from cord blood	blood
33	chr10:91393000-91403200	Weak transcription	Fetal Thymus	thymus
34	chr10:91393200-91399200	Strong transcription	HUES6 Cell Line	embryonic stem cell
35	chr10:91393200-91401600	Weak transcription	Fetal Kidney	kidney
36	chr10:91393600-91399200	Strong transcription	Primary hematopoietic stem cells short term culture	blood
37	chr10:91393800-91402600	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
38	chr10:91393800-91402800	Weak transcription	A549	lung
39	chr10:91393800-91403000	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
40	chr10:91394000-91402800	Weak transcription	Muscle Satellite Cultured Cells	--
41	chr10:91394200-91398200	Strong transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
42	chr10:91394200-91401600	Weak transcription	Hela-S3	cervix
43	chr10:91394200-91401800	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
44	chr10:91394200-91403000	Weak transcription	Fetal Brain Female	brain
45	chr10:91394400-91399400	Weak transcription	Fetal Intestine Large	intestine
46	chr10:91394400-91399600	Weak transcription	Fetal Heart	heart
47	chr10:91394400-91401600	Weak transcription	HMEC	breast
48	chr10:91394400-91403200	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
49	chr10:91394800-91400200	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
50	chr10:91394800-91401600	Weak transcription	Sigmoid Colon	Sigmoid Colon

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