The 2.0 version of rSNPBase

Variant report

Variant rs58227176
Chromosome Location chr3:155660025-155660026
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:92 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:155590200-155667400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
2 chr3:155607400-155669000 Weak transcription Pancreas Pancrea
3 chr3:155633800-155668200 Weak transcription ES-I3 Cell Line embryonic stem cell
4 chr3:155634600-155660600 Weak transcription Stomach Mucosa stomach
5 chr3:155635800-155664400 Weak transcription Gastric stomach
6 chr3:155639600-155664400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
7 chr3:155639600-155671000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
8 chr3:155644000-155663600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
9 chr3:155644000-155666800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
10 chr3:155644200-155662000 Weak transcription Brain Germinal Matrix brain
11 chr3:155644200-155665200 Weak transcription Fetal Stomach stomach
12 chr3:155646200-155665200 Weak transcription Fetal Intestine Small intestine
13 chr3:155648400-155661800 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
14 chr3:155648400-155663000 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
15 chr3:155648600-155661000 Strong transcription Dnd41 blood
16 chr3:155649000-155667400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
17 chr3:155649600-155660400 Strong transcription Monocytes-CD14+_RO01746 blood
18 chr3:155652600-155661000 Weak transcription Fetal Heart heart
19 chr3:155653000-155660400 Strong transcription Hela-S3 cervix
20 chr3:155653200-155662200 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
21 chr3:155654200-155675800 Weak transcription NHEK skin
22 chr3:155655200-155661200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
23 chr3:155655200-155663600 Weak transcription HSMMtube muscle
24 chr3:155655200-155666800 Weak transcription Lung lung
25 chr3:155655200-155667600 Weak transcription H9 Cell Line embryonic stem cell
26 chr3:155655400-155662600 Weak transcription Skeletal Muscle Male skeletal muscle
27 chr3:155655800-155664200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
28 chr3:155656000-155667200 Weak transcription iPS-15b Cell Line embryonic stem cell
29 chr3:155656200-155670400 Weak transcription Cortex derived primary cultured neurospheres brain
30 chr3:155656400-155660400 Weak transcription Sigmoid Colon Sigmoid Colon
31 chr3:155656400-155661000 Weak transcription Primary T killer memory cells from peripheral blood blood
32 chr3:155656400-155661000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
33 chr3:155656400-155661000 Weak transcription Fetal Brain Female brain
34 chr3:155656400-155661400 Weak transcription Thymus Thymus
35 chr3:155656400-155661800 Weak transcription Duodenum Smooth Muscle Duodenum
36 chr3:155656400-155664400 Weak transcription Fetal Muscle Leg muscle
37 chr3:155656600-155661400 Weak transcription Brain Inferior Temporal Lobe brain
38 chr3:155656600-155661600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
39 chr3:155656600-155663200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
40 chr3:155656600-155663600 Weak transcription NHDF-Ad bronchial
41 chr3:155656600-155664400 Weak transcription Aorta Aorta
42 chr3:155656600-155667000 Weak transcription H1 Cell Line embryonic stem cell
43 chr3:155656800-155661000 Weak transcription Brain Substantia Nigra brain
44 chr3:155656800-155663600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
45 chr3:155656800-155663800 Weak transcription NH-A brain
46 chr3:155657000-155661000 Weak transcription Primary T regulatory cells fromperipheralblood blood
47 chr3:155657000-155661000 Weak transcription Fetal Intestine Large intestine
48 chr3:155657000-155662400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
49 chr3:155657000-155663600 Weak transcription Osteobl bone
50 chr3:155657000-155664400 Weak transcription Left Ventricle heart

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Last update: Aug 31, 2015