Variant report

Variant	rs55868315
Chromosome Location	chr3:155854979-155854980
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 100 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:99)

rs_ID	r²[population]
rs13058807	1.00[ASN][1000 genomes]
rs13059614	1.00[ASN][1000 genomes]
rs13062883	1.00[ASN][1000 genomes]
rs13065118	1.00[ASN][1000 genomes]
rs13069492	1.00[ASN][1000 genomes]
rs13069920	1.00[ASN][1000 genomes]
rs13070956	1.00[ASN][1000 genomes]
rs13074749	1.00[ASN][1000 genomes]
rs13076854	1.00[ASN][1000 genomes]
rs13077891	1.00[ASN][1000 genomes]
rs13077893	1.00[ASN][1000 genomes]
rs13085540	1.00[ASN][1000 genomes]
rs13086158	1.00[ASN][1000 genomes]
rs13086539	1.00[ASN][1000 genomes]
rs13086617	1.00[ASN][1000 genomes]
rs13086888	1.00[ASN][1000 genomes]
rs13092781	1.00[ASN][1000 genomes]
rs13094737	1.00[ASN][1000 genomes]
rs13098116	1.00[ASN][1000 genomes]
rs13099875	1.00[ASN][1000 genomes]
rs1499053	1.00[ASN][1000 genomes]
rs16825721	1.00[ASN][1000 genomes]
rs16825722	1.00[ASN][1000 genomes]
rs2013676	1.00[ASN][1000 genomes]
rs28454940	1.00[ASN][1000 genomes]
rs28653682	1.00[ASN][1000 genomes]
rs28670754	1.00[ASN][1000 genomes]
rs34176040	1.00[ASN][1000 genomes]
rs34431563	1.00[ASN][1000 genomes]
rs34447473	1.00[ASN][1000 genomes]
rs34582489	1.00[ASN][1000 genomes]
rs34611996	1.00[ASN][1000 genomes]
rs34636155	1.00[ASN][1000 genomes]
rs34721485	1.00[ASN][1000 genomes]
rs34769075	1.00[ASN][1000 genomes]
rs34786673	1.00[ASN][1000 genomes]
rs34859273	1.00[ASN][1000 genomes]
rs34965136	1.00[ASN][1000 genomes]
rs34971897	1.00[ASN][1000 genomes]
rs35081098	1.00[ASN][1000 genomes]
rs35120330	1.00[ASN][1000 genomes]
rs35306833	1.00[ASN][1000 genomes]
rs35336094	1.00[ASN][1000 genomes]
rs35385116	1.00[ASN][1000 genomes]
rs35388604	1.00[ASN][1000 genomes]
rs35692708	1.00[ASN][1000 genomes]
rs35938711	1.00[ASN][1000 genomes]
rs35972274	1.00[ASN][1000 genomes]
rs36101183	1.00[ASN][1000 genomes]
rs36106222	1.00[ASN][1000 genomes]
rs36124391	1.00[ASN][1000 genomes]
rs4378930	0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs57525215	1.00[ASN][1000 genomes]
rs58227176	1.00[ASN][1000 genomes]
rs58487502	1.00[ASN][1000 genomes]
rs59289038	1.00[ASN][1000 genomes]
rs62284936	0.87[EUR][1000 genomes]
rs6441048	1.00[ASN][1000 genomes]
rs66496214	1.00[ASN][1000 genomes]
rs66718940	1.00[ASN][1000 genomes]
rs67049008	0.98[AFR][1000 genomes];0.94[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs67139403	1.00[ASN][1000 genomes]
rs67148190	1.00[ASN][1000 genomes]
rs67341546	1.00[ASN][1000 genomes]
rs67420553	1.00[ASN][1000 genomes]
rs67482406	1.00[ASN][1000 genomes]
rs6767282	1.00[ASN][1000 genomes]
rs6770125	1.00[ASN][1000 genomes]
rs6775190	1.00[ASN][1000 genomes]
rs67780510	1.00[ASN][1000 genomes]
rs6781558	1.00[ASN][1000 genomes]
rs67899274	1.00[ASN][1000 genomes]
rs67955446	1.00[ASN][1000 genomes]
rs6805895	1.00[ASN][1000 genomes]
rs68176279	1.00[ASN][1000 genomes]
rs68188495	1.00[ASN][1000 genomes]
rs71310462	1.00[ASN][1000 genomes]
rs71310463	1.00[ASN][1000 genomes]
rs71310465	1.00[ASN][1000 genomes]
rs71623492	1.00[ASN][1000 genomes]
rs73159074	1.00[ASN][1000 genomes]
rs73159092	1.00[ASN][1000 genomes]
rs73161026	1.00[ASN][1000 genomes]
rs73162706	1.00[ASN][1000 genomes]
rs73873481	1.00[ASN][1000 genomes]
rs7615469	1.00[ASN][1000 genomes]
rs7617514	1.00[ASN][1000 genomes]
rs7627181	1.00[ASN][1000 genomes]
rs7627649	1.00[ASN][1000 genomes]
rs7627831	1.00[ASN][1000 genomes]
rs7639203	1.00[ASN][1000 genomes]
rs7641186	1.00[ASN][1000 genomes]
rs7644218	1.00[ASN][1000 genomes]
rs7649451	1.00[ASN][1000 genomes]
rs9683003	1.00[ASN][1000 genomes]
rs9813738	1.00[ASN][1000 genomes]
rs9837458	1.00[ASN][1000 genomes]
rs9850516	1.00[ASN][1000 genomes]
rs9874263	1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv592085	chr3:155827634-156012679	Enhancers Weak transcription Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Flanking Active TSS Active TSS ZNF genes & repeats Strong transcription Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:155850400-155857200	Weak transcription	Ovary	ovary
2	chr3:155850400-155861800	Weak transcription	Right Atrium	heart
3	chr3:155851600-155856600	Weak transcription	Fetal Muscle Leg	muscle
4	chr3:155852800-155856800	Enhancers	Aorta	Aorta

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