The 2.0 version of rSNPBase

Variant report

Variant rs7617878
Chromosome Location chr3:155607847-155607848
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:109 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:155590200-155608400 Weak transcription Sigmoid Colon Sigmoid Colon
2 chr3:155590200-155643000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
3 chr3:155590200-155667400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
4 chr3:155591000-155611200 Weak transcription Fetal Muscle Leg muscle
5 chr3:155591000-155611800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
6 chr3:155591200-155612600 Weak transcription Primary B cells from cord blood blood
7 chr3:155591400-155611200 Weak transcription Fetal Thymus thymus
8 chr3:155591400-155616200 Weak transcription NHEK skin
9 chr3:155592000-155611800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
10 chr3:155592600-155608400 Weak transcription Hela-S3 cervix
11 chr3:155594200-155622000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
12 chr3:155596800-155611200 Weak transcription Thymus Thymus
13 chr3:155598600-155630000 Weak transcription Placenta Amnion Placenta Amnion
14 chr3:155598800-155608600 Weak transcription Dnd41 blood
15 chr3:155599400-155616400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
16 chr3:155599800-155611400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
17 chr3:155599800-155633400 Weak transcription Right Ventricle heart
18 chr3:155600000-155608400 Weak transcription Colon Smooth Muscle Colon
19 chr3:155600000-155611200 Weak transcription Primary B cells from peripheral blood blood
20 chr3:155600000-155612000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
21 chr3:155600400-155615400 Weak transcription Primary T killer memory cells from peripheral blood blood
22 chr3:155600400-155617200 Weak transcription iPS-15b Cell Line embryonic stem cell
23 chr3:155603000-155608400 Weak transcription Stomach Mucosa stomach
24 chr3:155603200-155608400 Weak transcription Pancreatic Islets Pancreatic Islet
25 chr3:155603200-155611000 Weak transcription iPS-20b Cell Line embryonic stem cell
26 chr3:155603800-155657800 Weak transcription Esophagus oesophagus
27 chr3:155604400-155658600 Weak transcription ES-WA7 Cell Line embryonic stem cell
28 chr3:155604800-155609400 Enhancers Primary T helper memory cells from peripheral blood 2 blood
29 chr3:155605000-155608000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
30 chr3:155605000-155632600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
31 chr3:155605600-155608400 Weak transcription A549 lung
32 chr3:155606400-155610800 Weak transcription HUES64 Cell Line embryonic stem cell
33 chr3:155606600-155609000 Enhancers Primary T helper cells PMA-I stimulated --
34 chr3:155606800-155608200 Enhancers Primary hematopoietic stem cells short term culture blood
35 chr3:155606800-155608400 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
36 chr3:155606800-155609000 Enhancers Fetal Adrenal Gland Adrenal Gland
37 chr3:155606800-155612000 Weak transcription Fetal Muscle Trunk muscle
38 chr3:155607000-155608000 Weak transcription NHLF lung
39 chr3:155607000-155608400 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
40 chr3:155607000-155608400 Weak transcription Brain Inferior Temporal Lobe brain
41 chr3:155607000-155608400 Enhancers Osteobl bone
42 chr3:155607000-155608600 Enhancers Primary T helper 17 cells PMA-I stimulated --
43 chr3:155607000-155608800 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
44 chr3:155607000-155608800 Enhancers Aorta Aorta
45 chr3:155607000-155609000 Enhancers Skeletal Muscle Female skeletal muscle
46 chr3:155607000-155609000 Enhancers HepG2 liver
47 chr3:155607000-155609000 Enhancers NHDF-Ad bronchial
48 chr3:155607000-155609800 Enhancers Ovary ovary
49 chr3:155607000-155633400 Weak transcription ES-I3 Cell Line embryonic stem cell
50 chr3:155607200-155608000 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived

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Last update: Aug 31, 2015