Variant report

Variant	rs58287058
Chromosome Location	chr3:157072909-157072910
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 33 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:33)

rs_ID	r²[population]
rs58892422	1.00[AMR][1000 genomes]
rs59252849	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs59359862	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs61290537	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73873603	1.00[AMR][1000 genomes]
rs73873610	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73873611	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73873612	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73873613	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73873617	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73873619	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73873622	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73873624	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73873627	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73873633	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73873646	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73873649	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73873651	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73873652	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73873653	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73873658	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73873660	1.00[AMR][1000 genomes]
rs73873665	1.00[AMR][1000 genomes]
rs73873668	1.00[AMR][1000 genomes]
rs73873671	1.00[AMR][1000 genomes]
rs73873674	1.00[AMR][1000 genomes]
rs73873677	1.00[AMR][1000 genomes]
rs73873679	1.00[AMR][1000 genomes]
rs73873790	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73873799	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73873801	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73873802	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73878004	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]

No data

Chromatin state (count:31 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:157066000-157073200	Weak transcription	HSMM	muscle
2	chr3:157066000-157076400	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
3	chr3:157066000-157086800	Weak transcription	Pancreas	Pancrea
4	chr3:157066600-157076000	Weak transcription	NH-A	brain
5	chr3:157066600-157083200	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
6	chr3:157066800-157074000	Weak transcription	NHLF	lung
7	chr3:157070400-157073400	Enhancers	NHDF-Ad	bronchial
8	chr3:157070400-157077400	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
9	chr3:157070800-157073200	Enhancers	Osteobl	bone
10	chr3:157071200-157073400	Enhancers	Foreskin Fibroblast Primary Cells skin02	Skin
11	chr3:157071600-157073400	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
12	chr3:157072000-157074800	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
13	chr3:157072000-157074800	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
14	chr3:157072200-157073200	Enhancers	H1 Cell Line	embryonic stem cell
15	chr3:157072200-157075400	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
16	chr3:157072400-157073200	Enhancers	HUES48 Cell Line	embryonic stem cell
17	chr3:157072400-157077200	Strong transcription	Foreskin Melanocyte Primary Cells skin03	Skin
18	chr3:157072600-157073200	Enhancers	Primary hematopoietic stem cells	blood
19	chr3:157072600-157073200	Enhancers	Muscle Satellite Cultured Cells	--
20	chr3:157072600-157073400	Enhancers	Brain Cingulate Gyrus	brain
21	chr3:157072600-157074200	Enhancers	HUVEC	blood vessel
22	chr3:157072800-157073000	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
23	chr3:157072800-157073000	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
24	chr3:157072800-157073000	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
25	chr3:157072800-157073000	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
26	chr3:157072800-157073200	Enhancers	ES-I3 Cell Line	embryonic stem cell
27	chr3:157072800-157073200	Enhancers	iPS-15b Cell Line	embryonic stem cell
28	chr3:157072800-157073200	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
29	chr3:157072800-157073200	Strong transcription	Foreskin Melanocyte Primary Cells skin01	Skin
30	chr3:157072800-157073200	Enhancers	A549	lung
31	chr3:157072800-157073400	Enhancers	K562	blood

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