Variant report

Variant	rs73873646
Chromosome Location	chr3:157070779-157070780
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 33 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:33)

rs_ID	r²[population]
rs58287058	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs58892422	1.00[AMR][1000 genomes]
rs59252849	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs59359862	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs61290537	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73873603	1.00[AMR][1000 genomes]
rs73873610	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73873611	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73873612	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73873613	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73873617	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73873619	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73873622	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73873624	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73873627	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73873633	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73873649	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73873651	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73873652	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73873653	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73873658	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73873660	1.00[AMR][1000 genomes]
rs73873665	1.00[AMR][1000 genomes]
rs73873668	1.00[AMR][1000 genomes]
rs73873671	1.00[AMR][1000 genomes]
rs73873674	1.00[AMR][1000 genomes]
rs73873677	1.00[AMR][1000 genomes]
rs73873679	1.00[AMR][1000 genomes]
rs73873790	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73873799	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73873801	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73873802	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73878004	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]

No data

Chromatin state (count:16 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:157056200-157072600	Weak transcription	HUVEC	blood vessel
2	chr3:157057000-157072800	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
3	chr3:157066000-157073200	Weak transcription	HSMM	muscle
4	chr3:157066000-157076400	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
5	chr3:157066000-157086800	Weak transcription	Pancreas	Pancrea
6	chr3:157066600-157071200	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
7	chr3:157066600-157076000	Weak transcription	NH-A	brain
8	chr3:157066600-157083200	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
9	chr3:157066800-157072200	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
10	chr3:157066800-157074000	Weak transcription	NHLF	lung
11	chr3:157067000-157071600	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
12	chr3:157068400-157070800	Weak transcription	Osteobl	bone
13	chr3:157068400-157072600	Weak transcription	Muscle Satellite Cultured Cells	--
14	chr3:157070200-157072400	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
15	chr3:157070400-157073400	Enhancers	NHDF-Ad	bronchial
16	chr3:157070400-157077400	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links